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13_1_40cm_4_scaffold_1311

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1311_1
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..156
DNA (156bp) protein (52aa)
transcriptional regulator domain-containing protein Tax=RBG_16_Gamma2_64_10_curated
13_1_40cm_4_scaffold_1311_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(816..2030)
DNA (1215bp) protein (405aa)
transporter n=1 Tax=Serratia marcescens RepID=UPI000308EA14
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
major facilitator superfamily transporter
13_1_40cm_4_scaffold_1311_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2042..2461)
DNA (420bp) protein (140aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase [EC:4.4.1.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JG8_MESSB
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_4_scaffold_1311_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2474..2623)
DNA (150bp) protein (50aa)
alcohol dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
Alcohol dehydrogenase, zinc-binding domain protein id=2319311 bin=GWA2_Methylomirabilis_73_35 species=Calothrix sp. PCC 7507 genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase
13_1_40cm_4_scaffold_1311_5
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2657..3490)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035EF1FE
putative carboxyvinyl-carboxyphosphonate phosphorylmutase Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
hypothetical protein
13_1_40cm_4_scaffold_1311_6
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3499..4014)
DNA (516bp) protein (172aa)
TPR repeat n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BT9_POLSJ
hypothetical protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hypothetical protein
13_1_40cm_4_scaffold_1311_7
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4031..5590)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002F40025
Uncharacterized protein {ECO:0000313|EMBL:EHP41604.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basile
conserved protein of unknown function, TPR repeat domain
13_1_40cm_4_scaffold_1311_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5889..6434)
DNA (546bp) protein (182aa)
hypothetical protein; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Putative uncharacterized protein id=4935489 bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pcaC; hypothetical protein
13_1_40cm_4_scaffold_1311_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6741..8012)
DNA (1272bp) protein (424aa)
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA Tax=GWA2_Rokubacteria_70_23_curated
CinA-like protein id=4532703 bin=GWF2_Methylomirabilis_70_14 species=Shewanella sediminis genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
competence/damage-inducible protein CinA
13_1_40cm_4_scaffold_1311_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8427..9392
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003718233
Uncharacterized protein {ECO:0000313|EMBL:ETX03064.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_4_scaffold_1311_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9512..10600)
DNA (1089bp) protein (363aa)
mdh2; malate dehydrogenase (EC:1.1.1.37) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
malate/L-lactate dehydrogenase (EC:1.1.1.-)
Malate/L-lactate dehydrogenase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FEA8_9BURK
13_1_40cm_4_scaffold_1311_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10597..11127)
DNA (531bp) protein (177aa)
Glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase n=2 Tax=Cupriavidus RepID=L2EJ51_9BURK
SCIF3.06c; oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase
13_1_40cm_4_scaffold_1311_13
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11188..11367)
DNA (180bp) protein (60aa)
Hydrolase {ECO:0000313|EMBL:KKA37612.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
hypothetical protein
13_1_40cm_4_scaffold_1311_14
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11375..11872)
DNA (498bp) protein (166aa)
6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase {ECO:0000313|EMBL:AIF52548.1}; EC=3.1.1.31 {ECO:0000313|EMBL:AIF52548.1};; Flags: Precursor;; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veil
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI000379C4C1
13_1_40cm_4_scaffold_1311_15
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11869..12546)
DNA (678bp) protein (226aa)
6-phosphogluconolactonase (EC:3.1.1.31)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI000379C4C1
Hemagglutinin {ECO:0000313|EMBL:KJB96804.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC
13_1_40cm_4_scaffold_1311_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12644..13960)
DNA (1317bp) protein (439aa)
TRAP transporter, DctM subunit 7 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HI07_ACHXA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
TRAP transporter subunit DctM
13_1_40cm_4_scaffold_1311_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13957..14466)
DNA (510bp) protein (170aa)
Tripartite AtP-independent periplasmic transporter subunit DctQ n=1 Tax=Oceanibaculum indicum P24 RepID=K2KHR3_9PROT
tripartite ATP-independent periplasmic transporter DctQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tripartite AtP-independent periplasmic transporter subunit DctQ
13_1_40cm_4_scaffold_1311_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14463..15473)
DNA (1011bp) protein (337aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6C271_DESAD
TRAP dicarboxylate transporter-DctP subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TRAP dicarboxylate transporter-DctP subunit
13_1_40cm_4_scaffold_1311_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15508..16716)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003629DA3
Uncharacterized protein {ECO:0000313|EMBL:ETX01280.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amidohydrolase
13_1_40cm_4_scaffold_1311_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(16936..17646)
DNA (711bp) protein (237aa)
hydrophobic amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) id=1906303 bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hydrophobic amino acid ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_1311_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17650..18387)
DNA (738bp) protein (246aa)
ABC transporter related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBK2_9CHLR
branched-chain amino acid transport ATP-binding protein LivG; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
branched-chain amino acid transport ATP-binding protein LivG
13_1_40cm_4_scaffold_1311_22
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(18390..19304)
DNA (915bp) protein (305aa)
ABC transporter permease protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VI9_BRADU
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter permease
13_1_40cm_4_scaffold_1311_23
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(19301..20179)
DNA (879bp) protein (293aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Polaromonas sp. CF318 RepID=J2KPZ7_9BURK
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
branched-chain amino acid ABC transporter permease protein
13_1_40cm_4_scaffold_1311_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(20316..21488)
DNA (1173bp) protein (391aa)
Extracellular ligand-binding receptor n=1 Tax=Burkholderia sp. H160 RepID=B5WB26_9BURK
braC2; amino acid ABC transporter; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
braC2; amino acid ABC transporter
13_1_40cm_4_scaffold_1311_25
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21488..22720)
DNA (1233bp) protein (411aa)
LVIVD repeat protein n=1 Tax=Burkholderia sp. H160 RepID=B5WB25_9BURK
LVIVD repeat protein {ECO:0000313|EMBL:EEA04373.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160
hypothetical protein
13_1_40cm_4_scaffold_1311_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22741..23736)
DNA (996bp) protein (332aa)
Luciferase-like monooxygenase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0K1_VARPS
luciferase-like monooxygenase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
luciferase-like monooxygenase
13_1_40cm_4_scaffold_1311_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23753..23905)
DNA (153bp) protein (51aa)
Gluconolactonase (EC:3.1.1.17) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SMP-30/gluconolaconase/LRE domain-containing protein (EC:3.1.1.17); K01053 gluconolactonase [EC:3.1.1.17]
Displaying 27 items

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