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13_1_40cm_4_scaffold_1655

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1655_1
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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3..308
DNA (306bp) protein (102aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A5J2_DEIPD
5'-nucleotidase
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase {ECO:0000313|EMBL:AFZ68290.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococ
13_1_40cm_4_scaffold_1655_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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441..749
DNA (309bp) protein (103aa)
gamma-glutamyltransferase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=GWA2_Rokubacteria_70_23_curated
ggt; gamma-glutamyltranspeptidase (EC:2.3.2.2)
Gamma-glutamyltransferase id=2650867 bin=GWF2_Methylomirabilis_70_14 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1655_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(751..1053)
DNA (303bp) protein (101aa)
Redoxin domain protein id=4646441 bin=GWA2_Methylomirabilis_73_35 species=Oceaniovalibus guishaninsula genus=Oceaniovalibus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Redoxin domain protein Tax=GWA2_Rokubacteria_73_35_curated
Redoxin domain-containing protein
13_1_40cm_4_scaffold_1655_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1072..1284)
DNA (213bp) protein (71aa)
Thioredoxin family protein id=4646438 bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Thioredoxin family protein Tax=GWA2_Rokubacteria_73_35_curated
thioredoxin-like protein
13_1_40cm_4_scaffold_1655_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1281..1517)
DNA (237bp) protein (79aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=GWA2_Rokubacteria_73_35_curated
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=4646434 bin=GWA2_Methylomirabilis_73_35 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1655_6
R_NC10_66_22, NC10, Bacteria

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comp(1623..1835)
DNA (213bp) protein (71aa)
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=4646430 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1655_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1902..2045
DNA (144bp) protein (48aa)
putative fatty-acid--CoA ligase (EC:6.2.1.-) Tax=GWA2_Rokubacteria_73_35_curated
AMP-dependent synthetase and ligase id=4143225 bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative acyl-CoA synthetase
13_1_40cm_4_scaffold_1655_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(2067..2396)
DNA (330bp) protein (110aa)
gas vesicle protein GvpK n=1 Tax=Nonomuraea coxensis RepID=UPI000373F8BE
gas vesicle K Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
gvpK; gas vesicle protein GvpK
13_1_40cm_4_scaffold_1655_9
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2423..3109)
DNA (687bp) protein (229aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF10189.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
13_1_40cm_4_scaffold_1655_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(3106..3333)
DNA (228bp) protein (76aa)
gas vesicle protein GVPa
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_4_scaffold_1655_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(3330..4124)
DNA (795bp) protein (265aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Rhodococcus sp. EsD8 RepID=N1LZT9_9NOCA
gas vesicle synthesis protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_4_scaffold_1655_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4108..6129)
DNA (2022bp) protein (674aa)
arsenite-activated ATPase ArsA (EC:3.6.3.16); K01551 arsenite-transporting ATPase [EC:3.6.3.16] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
arsenite-activated ATPase ArsA (EC:3.6.3.16)
Arsenite efflux ATP-binding protein ArsA n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5D4_GEOUR
13_1_40cm_4_scaffold_1655_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6165..6449)
DNA (285bp) protein (95aa)
gas vesicle G
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_4_scaffold_1655_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6446..7345)
DNA (900bp) protein (300aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ8_KORVE
gas vesicle synthesis GvpLGvpF Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Gas vesicle synthesis GvpLGvpF
13_1_40cm_4_scaffold_1655_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(7698..8102)
DNA (405bp) protein (135aa)
Response regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWY3_CORCM
response regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
divK; response regulator
13_1_40cm_4_scaffold_1655_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8099..10258)
DNA (2160bp) protein (720aa)
Sensory box histidine kinase n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DC18_MYXXD
sensory box histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
sensory box histidine kinase
13_1_40cm_4_scaffold_1655_17
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10262..10603)
DNA (342bp) protein (114aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
Gas vesicle structural protein (GVP) {ECO:0000313|EMBL:AKF10197.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" so
Gas vesicle structural protein
13_1_40cm_4_scaffold_1655_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10607..10936)
DNA (330bp) protein (110aa)
Gas vesicle structural protein n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9SQG2_9SYNE
Putative gas vesicle synthesis protein {ECO:0000313|EMBL:AKF10198.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;"
gas vesicle protein GVPa
13_1_40cm_4_scaffold_1655_19
'Deinococcus soli' Cha et al. 2014, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(11190..11591)
DNA (402bp) protein (134aa)
membrane protein n=1 Tax=Brachybacterium squillarum RepID=UPI0002629AD4
Membrane protein {ECO:0000313|EMBL:AKH16233.1}; TaxID=1309411 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="'Deinococcus soli' Cha et al. 20
hypothetical protein
13_1_40cm_4_scaffold_1655_20
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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11628..12674
DNA (1047bp) protein (349aa)
Amino acid or sugar ABC transport system, permease protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F7F7_9DELT
Amino acid or sugar ABC transport system, permease protein {ECO:0000313|EMBL:EFK08295.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
ABC transporter-like protein
13_1_40cm_4_scaffold_1655_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12747..13142
DNA (396bp) protein (132aa)
fdhA; formate dehydrogenase, alpha subunit (fdhA2) (EC:1.2.1.2) Tax=GWA2_Rokubacteria_73_35_curated
fdhA; formate dehydrogenase, alpha subunit (fdhA2) (EC:1.2.1.2)
Formate dehydrogenase, alpha subunit (FdhA2) id=4493797 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_1655_22
unknown

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13139..13258
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_40cm_4_scaffold_1655_23
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

13255..13770
DNA (516bp) protein (172aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein id=14429806 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1655_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13860..14975
DNA (1116bp) protein (372aa)
putative aminotransferase Tax=GWA2_Rokubacteria_70_23_curated
2-aminoethylphosphonate aminotransferase id=3897277 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative aminotransferase
13_1_40cm_4_scaffold_1655_25
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14978..15541
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Vitreoscilla stercoraria RepID=UPI00037841FF
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
13_1_40cm_4_scaffold_1655_26
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15574..16548)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI000367ECB1
type 11 methyltransferase Tax=RBG_13_Deltaproteobacteria_61_14_curated
type 11 methyltransferase
13_1_40cm_4_scaffold_1655_27
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16859..17188
DNA (330bp) protein (110aa)
Putative lipoprotein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJX3_METPP
transport-associated protein; K04065 hyperosmotically inducible periplasmic protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
lipoprotein
13_1_40cm_4_scaffold_1655_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17320..17808)
DNA (489bp) protein (163aa)
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC-3 protein; K02075 zinc/manganese transport system permease protein id=14627589 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_1655_29
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(18545..19297)
DNA (753bp) protein (251aa)
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein id=14627590 bin=bin7_NC10_sister species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
periplasmic solute binding protein
Displaying 29 items

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