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13_1_40cm_4_scaffold_18332

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_18332_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..533
DNA (531bp) protein (177aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein id=5010007 bin=GWA2_Methylomirabilis_73_35 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldehyde oxidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_1_40cm_4_scaffold_18332_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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546..1547
DNA (1002bp) protein (334aa)
carbon monoxide dehydrogenase (EC:1.2.99.2); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=GWA2_Rokubacteria_73_35_curated
Molybdopterin dehydrogenase FAD-binding protein id=5010008 bin=GWA2_Methylomirabilis_73_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin dehydrogenase FAD-binding protein
13_1_40cm_4_scaffold_18332_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1544..2119
DNA (576bp) protein (192aa)
MobA-like protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] Tax=GWA2_Rokubacteria_73_35_curated
Molybdenum cofactor cytidylyltransferase id=5010009 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MobA-like protein
13_1_40cm_4_scaffold_18332_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2126..3019
DNA (894bp) protein (298aa)
ATPase AAA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATPase associated with various cellular activities AAA_5 id=5010010 bin=GWA2_Methylomirabilis_73_35 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATPase associated with various cellular activities AAA_5
13_1_40cm_4_scaffold_18332_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3020..4168
DNA (1149bp) protein (383aa)
VWA domain containing CoxE-like protein; K07161 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
VWA domain containing CoxE-like protein id=5010011 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
VWA containing CoxE family protein
13_1_40cm_4_scaffold_18332_6
unknown

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4350..4646
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_4_scaffold_18332_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4728..5894
DNA (1167bp) protein (389aa)
Putative uncharacterized protein id=5010012 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K07402 xanthine dehydrogenase accessory factor Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_18332_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5891..6931
DNA (1041bp) protein (347aa)
molybdopterin binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdopterin binding domain-containing protein id=5010013 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding domain-containing protein
13_1_40cm_4_scaffold_18332_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6928..7317
DNA (390bp) protein (130aa)
SUF system FeS assembly protein id=5010014 bin=GWA2_Methylomirabilis_73_35 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins Tax=GWA2_Rokubacteria_73_35_curated
NifU family SUF system FeS assembly protein
13_1_40cm_4_scaffold_18332_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7314..8522
DNA (1209bp) protein (403aa)
SufS subfamily cysteine desulfurase (EC:4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=GWA2_Rokubacteria_73_35_curated
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase id=5010015 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_18332_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8925..9434
DNA (510bp) protein (170aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
agmatinase; K01480 agmatinase [EC:3.5.3.11] id=14627707 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
agmatinase (EC:3.5.3.11)
13_1_40cm_4_scaffold_18332_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9431..10738
DNA (1308bp) protein (436aa)
hypothetical protein; K07403 membrane-bound serine protease (ClpP class) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative protease/transporter id=5010016 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
membrane-bound serine protease
13_1_40cm_4_scaffold_18332_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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10735..11415
DNA (681bp) protein (227aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Uncharacterized protein id=2586442 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_18332_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11818..12168
DNA (351bp) protein (117aa)
Histidine triad (HIT) protein id=4334202 bin=GWA2_Methylomirabilis_73_35 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=GWA2_Rokubacteria_73_35_curated
histidine triad (HIT) protein
Displaying 14 items

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