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13_1_40cm_4_scaffold_192

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_192_1
unknown

Not on your lists

comp(3..89)
DNA (87bp) protein (29aa)

This feature has no annotations

13_1_40cm_4_scaffold_192_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134..1111)
DNA (978bp) protein (326aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=1937568 bin=GWD2_Deltaproteobacteria_55_8 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_192_3
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

1227..2015
DNA (789bp) protein (263aa)
gluconate 2-dehydrogenase (EC:1.1.99.3)
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEG34498.1}; EC=1.1.99.3 {ECO:0000313|EMBL:AEG34498.1};; Flags: Precursor;; TaxID=762633 species="Bacteria; Deinococcus-Thermus; Deinococci; Ther
Gluconate 2-dehydrogenase (Acceptor) n=1 Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DJA1_THETG
13_1_40cm_4_scaffold_192_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2025..3791
DNA (1767bp) protein (589aa)
gluconate 2-dehydrogenase (EC:1.1.99.3); K06151 gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
gluconate 2-dehydrogenase (EC:1.1.99.3)
Gluconate 2-dehydrogenase (Acceptor) n=1 Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DJA0_THETG
13_1_40cm_4_scaffold_192_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3763..5943)
DNA (2181bp) protein (727aa)
Xanthine dehydrogenase, molybdenum binding subunit (EC:1.17.1.4) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Putative aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=1 Tax=uncultured marine microorganism HF4000_ANIW93N21 RepID=B3T365_9ZZZZ
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
13_1_40cm_4_scaffold_192_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6060..7043)
DNA (984bp) protein (328aa)
methylenetetrahydromethanopterin reductase (EC:1.5.99.11) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V0F6_MYCVA
5,10-methylene tetrahydromethanopterin reductase
13_1_40cm_4_scaffold_192_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7040..8230)
DNA (1191bp) protein (397aa)
Adenine deaminase n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UDS9_MYCVA
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
adenine deaminase
13_1_40cm_4_scaffold_192_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8227..9234)
DNA (1008bp) protein (336aa)
luciferase-like monooxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
luciferase-like protein id=14626337 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_192_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9299..10045)
DNA (747bp) protein (249aa)
fatty acid desaturase Tax=GWA2_Rokubacteria_70_23_curated
Putative fatty acid desaturase id=4918777 bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_APKG10H12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
fatty acid desaturase family protein
13_1_40cm_4_scaffold_192_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(10048..10398)
DNA (351bp) protein (117aa)
hypothetical protein id=5002882 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
13_1_40cm_4_scaffold_192_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10408..10959)
DNA (552bp) protein (184aa)
id=2556866 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=3639818 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_4_scaffold_192_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11075..11392)
DNA (318bp) protein (106aa)
id=2556868 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=2556868 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_4_scaffold_192_13
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

11513..11770
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI000371F066
hypothetical protein Tax=GWC2_Chloroflexi_49_37_curated
hypothetical protein
13_1_40cm_4_scaffold_192_14
unknown

Not on your lists

11757..11981
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_4_scaffold_192_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12040..13611)
DNA (1572bp) protein (524aa)
Hydrogenase, large subunit-like protein (HycE-like) id=3938369 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hydrogenase, large subunit-like protein (HycE-like) Tax=GWA2_Rokubacteria_70_23_curated
hydrogenase, large subunit-like protein (HycE-like)
13_1_40cm_4_scaffold_192_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13608..15050)
DNA (1443bp) protein (481aa)
hyfF; hydrogenase-4 component F (EC:1.-.-.-) Tax=GWA2_Rokubacteria_70_23_curated
hyfF; hydrogenase-4 component F (EC:1.-.-.-)
Hydrogenase-4 component F id=3938372 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_192_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15073..15729)
DNA (657bp) protein (219aa)
Uncharacterized protein id=3938429 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_4_scaffold_192_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15734..16675)
DNA (942bp) protein (314aa)
Similar to membrane-bound [NiFe]-hydrogenase-3, subunit D id=3938430 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hycD; membrane-bound [NiFe]-hydrogenase-3, subunit D Tax=GWA2_Rokubacteria_70_23_curated
hycD; membrane-bound [NiFe]-hydrogenase-3, subunit D
13_1_40cm_4_scaffold_192_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16672..18693)
DNA (2022bp) protein (674aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=3938431 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_192_20
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18690..19217)
DNA (528bp) protein (176aa)
hycG; hycG protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
HycG protein id=3938433 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hycG; hycG protein
13_1_40cm_4_scaffold_192_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19219..19566)
DNA (348bp) protein (116aa)
Transcriptional regulator id=3938436 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator Tax=GWA2_Rokubacteria_70_23_curated
arsR9; smtB-like transcriptional repressor
13_1_40cm_4_scaffold_192_22
unknown

Not on your lists

comp(19635..19853)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_4_scaffold_192_23
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(19989..20414)
DNA (426bp) protein (142aa)
amidohydrolase 2 id=4217943 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase 2 Tax=GWC2_Rokubacteria_70_16_curated
amidohydrolase 2
13_1_40cm_4_scaffold_192_24
unknown

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comp(21184..21351)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_192_25
unknown

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21433..21693
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_192_26
unknown

Not on your lists

comp(21841..21942)
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_40cm_4_scaffold_192_27
unknown

Not on your lists

comp(22213..22401)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_4_scaffold_192_28
unknown

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comp(22686..22772)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 28 items

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