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13_1_40cm_4_scaffold_2221

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2221_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..293)
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:AHY52650.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
Zn-dependent hydrolase
13_1_40cm_4_scaffold_2221_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(676..1305)
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:AHY52652.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
13_1_40cm_4_scaffold_2221_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1460..2308)
DNA (849bp) protein (283aa)
High-affinity nickel-transport family protein id=2750987 bin=GWC2_Methylomirabilis_70_16 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
high-affinity nickel-transport family protein Tax=GWC2_Rokubacteria_70_16_curated
high-affinity nickel-transporter
13_1_40cm_4_scaffold_2221_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2396..3745
DNA (1350bp) protein (450aa)
UbiD family decarboxylase n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IR53_9BURK
carboxylyase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ubiD; ubiD decarboxylase family protein
13_1_40cm_4_scaffold_2221_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3742..3906
DNA (165bp) protein (55aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_40cm_4_scaffold_2221_6
unknown

Not on your lists

3970..4218
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_4_scaffold_2221_7
unknown

Not on your lists

4237..4512
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_2221_8
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4769..6262
DNA (1494bp) protein (498aa)
2,4-dichlorophenol 6-monooxygenase {ECO:0000313|EMBL:EZP50521.1}; EC=1.14.13.20 {ECO:0000313|EMBL:EZP50521.1};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WB59_DELAC
hypothetical protein
13_1_40cm_4_scaffold_2221_9
unknown

Not on your lists

comp(6253..6387)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_4_scaffold_2221_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6572..8989)
DNA (2418bp) protein (806aa)
UbiD-type (de) carboxylyase-like protein id=14626327 bin=bin7_NC10_sister species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
UbiD-type (de) carboxylyase-like protein Tax=CSP1_6_Rokubacteria
UbiD-type (de) carboxylyase-like protein
13_1_40cm_4_scaffold_2221_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(9016..10290)
DNA (1275bp) protein (425aa)
MnbF n=1 Tax=Citreicella sp. SE45 RepID=D0DDB2_9RHOB
protein MnbF; K11690 C4-dicarboxylate transporter, DctM subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
protein MnbF
13_1_40cm_4_scaffold_2221_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10294..10890)
DNA (597bp) protein (199aa)
MnbE n=1 Tax=Comamonas sp. JS46 RepID=Q5GDA0_9BURK
tripartite ATP-independent periplasmic transporter DctQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
tripartite ATP-independent periplasmic transporter DctQ component
13_1_40cm_4_scaffold_2221_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10866..11111)
DNA (246bp) protein (82aa)
Putative acyl-CoA synthetase n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82NF7_STRAW
lcfB3; long-chain-fatty-acid--CoA ligase LcfB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
acid:CoA ligase
13_1_40cm_4_scaffold_2221_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11084..12316)
DNA (1233bp) protein (411aa)
AMP-dependent synthetase and ligase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JEH9_HYPSM
lcfB3; long-chain-fatty-acid--CoA ligase LcfB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
AMP-dependent synthetase/ligase
13_1_40cm_4_scaffold_2221_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12330..13109)
DNA (780bp) protein (260aa)
fabG9; 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC:1.1.1.100)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035E4AF1
Uncharacterized protein {ECO:0000313|EMBL:ETX00238.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_4_scaffold_2221_16
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13199..14191
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13PB1_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE34078.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenov
13_1_40cm_4_scaffold_2221_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14201..15883)
DNA (1683bp) protein (561aa)
Amidohydrolase 3 n=2 Tax=Sphingomonas wittichii RepID=A5V830_SPHWW
amidohydrolase 3 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
amidohydrolase 3
13_1_40cm_4_scaffold_2221_18
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15904..17013)
DNA (1110bp) protein (370aa)
Amidohydrolase n=1 Tax=Prochloron didemni P1-Palau RepID=G0XS52_PRODI
Uncharacterized protein {ECO:0000313|EMBL:ETX04634.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
barH; barh protein
13_1_40cm_4_scaffold_2221_19
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17157..18233
DNA (1077bp) protein (359aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWD2_Deltaproteobacteria_55_8_curated
serA; D-3-phosphoglycerate dehydrogenase SerA (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase id=1940935 bin=GWD2_Deltaproteobacteria_55_8 species=Thermosynechococcus elongatus genus=Thermosynechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_2221_20
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18926..20827
DNA (1902bp) protein (634aa)
cell division protein FtsK n=1 Tax=Dyella japonica RepID=UPI0002E26E68
cell division protein FtsK
Cell division protein FtsK {ECO:0000313|EMBL:KGE03515.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
13_1_40cm_4_scaffold_2221_21
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20903..21853)
DNA (951bp) protein (317aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
dth:DICTH_1037 oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein id=1242173 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_4_scaffold_2221_22
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(21861..22586)
DNA (726bp) protein (242aa)
sta:STHERM_c02790 oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein id=1242174 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Chloroflexi_51_36_curated
dppD; dipeptide ABC transporter (ATP-binding protein)
13_1_40cm_4_scaffold_2221_23
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22779..23720)
DNA (942bp) protein (314aa)
Peptide ABC transporter permease {ECO:0000313|EMBL:ETX08379.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. T
ABC transporter permease; K02034 peptide/nickel transport system permease protein id=1242175 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Oligopeptide transport system permease AppC
13_1_40cm_4_scaffold_2221_24
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(23707..24630)
DNA (924bp) protein (308aa)
h16_A2950; ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_13_Chloroflexi_46_14_curated
Dipeptide transport system permease DppB id=4526369 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dppB; dipeptide transport system permease DppB
13_1_40cm_4_scaffold_2221_25
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(24636..26249)
DNA (1614bp) protein (538aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Acidobacteria_64_8_curated
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
13_1_40cm_4_scaffold_2221_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26777..28003
DNA (1227bp) protein (409aa)
Possible streptogramin lyase, gluconolactonase family protein n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6Z1T3_9ALTE
lyase -like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
lyase -like protein
13_1_40cm_4_scaffold_2221_27
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28140..28652
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46YT3_CUPPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ61700.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatub
13_1_40cm_4_scaffold_2221_28
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

28761..29198
DNA (438bp) protein (146aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodovulum sp. PH10 RepID=J9DDQ6_9RHOB
ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
nitrate/sulfonate/bicarbonate ABC transporter permease
13_1_40cm_4_scaffold_2221_29
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29320..30426
DNA (1107bp) protein (369aa)
Transporter, chromate ion transporter (CHR) family n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JM15_SYNJB
Uncharacterized protein {ECO:0000313|EMBL:ETX06016.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
chromate transporter
13_1_40cm_4_scaffold_2221_30
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

30492..31247
DNA (756bp) protein (252aa)
ATPase n=1 Tax=Rhodovulum sp. PH10 RepID=J9DTD5_9RHOB
ssuB; putative sulfonate ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ABC transporter related
Displaying items 1-30 of 31 in total

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