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13_1_40cm_4_scaffold_2533

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2533_1
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161..1624)
DNA (1464bp) protein (488aa)
UbiD family decarboxylase Tax=RBG_13_Deltaproteobacteria_53_10_curated
UbiD family decarboxylases id=2064952 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD family decarboxylase
13_1_40cm_4_scaffold_2533_2
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1632..2696)
DNA (1065bp) protein (355aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
Reactivating factor for ethanolamine ammonia lyase id=1839689 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_2533_3
unknown

Not on your lists

2825..2983
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_4_scaffold_2533_4
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3001..3621)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IPP6_9BACT
hypothetical protein Tax=CG_Delta_02
hypothetical protein
13_1_40cm_4_scaffold_2533_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3618..4037)
DNA (420bp) protein (140aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_4_scaffold_2533_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4226..4840)
DNA (615bp) protein (205aa)
ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
3-octaprenyl-4-hydroxybenzoate carboxy-lyase id=3212382 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Edwardsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_2533_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4837..7314)
DNA (2478bp) protein (826aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX00251.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
CoA-transferase family iii id=14626090 bin=bin7_NC10_sister species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
coaT; family III CoA-transferase subunit
13_1_40cm_4_scaffold_2533_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7424..8692)
DNA (1269bp) protein (423aa)
ubiD_R; UbiD-like subunit of putative (de) carboxylase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ubiD3; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD3 (EC:4.1.1.-)
UbiD2: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase id=2065167 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_2533_9
unknown

Not on your lists

9056..9730
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_40cm_4_scaffold_2533_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9881..10525
DNA (645bp) protein (215aa)
Putative ethanolamine utilisation protein EutA id=1746305 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW93N21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
eutA; Ethanolamine utilization protein eutA Tax=GWD2_Deltaproteobacteria_55_8_curated
eutA; Ethanolamine utilization protein eutA
13_1_40cm_4_scaffold_2533_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10554..11282
DNA (729bp) protein (243aa)
Putative ethanolamine utilisation protein EutA id=1746305 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW93N21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
eutA; Ethanolamine utilization protein eutA Tax=GWD2_Deltaproteobacteria_55_8_curated
eutA; Ethanolamine utilization protein eutA
13_1_40cm_4_scaffold_2533_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11419..12132)
DNA (714bp) protein (238aa)
ribulose-5-phosphate 4-epimerase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE6C4
class II aldolase/adducin family protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
class II aldolase/adducin family protein
13_1_40cm_4_scaffold_2533_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12393..12890)
DNA (498bp) protein (166aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_2533_14
unknown

Not on your lists

comp(12887..13147)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_2533_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13352..14650)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J516_NOSP7
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
13_1_40cm_4_scaffold_2533_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14676..15092)
DNA (417bp) protein (139aa)
pyridoxamine 5'-phosphate oxidase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Pyridoxamine 5'-phosphate oxidase-related FMN-binding id=1863214 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxamine 5'-phosphate oxidase-like protein
13_1_40cm_4_scaffold_2533_17
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15122..15880)
DNA (759bp) protein (253aa)
short-chain alcohol dehydrogenase Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Short-chain dehydrogenase id=2247805 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain alcohol dehydrogenase
13_1_40cm_4_scaffold_2533_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15900..16883)
DNA (984bp) protein (328aa)
NHL repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein SpalD1_28839 id=3396029 bin=GWC2_Syntrophus__56_31 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_40cm_4_scaffold_2533_19
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(17000..17833)
DNA (834bp) protein (278aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH94_THET1
monosaccharide-transporting ATPase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
binding-protein-dependent transporters inner membrane component
13_1_40cm_4_scaffold_2533_20
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(17833..18768)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000375F57E
sugar ABC transporter permease Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_4_scaffold_2533_21
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(18765..20033)
DNA (1269bp) protein (423aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QRT9_SPHPG
carbohydrate ABC transporter substrate-binding protein, CUT1 family; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
sugar ABC transporter periplasmic protein
13_1_40cm_4_scaffold_2533_22
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(20106..21527)
DNA (1422bp) protein (474aa)
enantiomer-selective amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
amidase (EC:3.5.1.4)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXU3_ROSS1
13_1_40cm_4_scaffold_2533_23
unknown

Not on your lists

comp(21687..22136)
DNA (450bp) protein (150aa)

This feature has no annotations

Displaying 23 items

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