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13_1_40cm_4_scaffold_2588

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2588_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1070)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037C1266
Uncharacterized protein {ECO:0000313|EMBL:ETX07579.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
monooxygenase
13_1_40cm_4_scaffold_2588_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1067..1882)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003786F65
Uncharacterized protein {ECO:0000313|EMBL:ETW95448.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Putative hydrolase
13_1_40cm_4_scaffold_2588_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1975..2640)
DNA (666bp) protein (222aa)
h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
13_1_40cm_4_scaffold_2588_4

Not on your lists

comp(2637..3269)
DNA (633bp) protein (211aa)
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Bacterial extracellular solute-binding proteins, family 5 Middle {ECO:0000313|EMBL:AIA17927.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
family 5 extracellular solute-binding protein
13_1_40cm_4_scaffold_2588_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3450..4043)
DNA (594bp) protein (198aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Thiamine pyrophosphate enzyme-like TPP-binding protein id=4221512 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_2588_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4040..4570)
DNA (531bp) protein (177aa)
Bll3172 protein id=4193707 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sulfopyruvate decarboxylase subunit alpha Tax=GWC2_Rokubacteria_70_16_curated
sulfopyruvate decarboxylase subunit alpha
13_1_40cm_4_scaffold_2588_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4592..5629)
DNA (1038bp) protein (346aa)
Putative dioxygenase, 2OG-Fe(II) oxygenase superfamily protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMT8_9PROT
2OG-Fe(II) oxygenase superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
2OG-Fe(II) oxygenase superfamily protein
13_1_40cm_4_scaffold_2588_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5653..6705)
DNA (1053bp) protein (351aa)
putative 2-dehydropantoate 2-reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-dehydropantoate 2-reductase id=4221488 bin=GWA2_Methylomirabilis_73_35 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_2588_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6780..7592
DNA (813bp) protein (271aa)
rluD_3; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWA2_Rokubacteria_73_35_curated
RNA pseudouridylate synthase id=1890952 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA pseudouridylate synthase
13_1_40cm_4_scaffold_2588_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7612..8388)
DNA (777bp) protein (259aa)
Putative uncharacterized protein id=3327080 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_4_scaffold_2588_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8883..10634
DNA (1752bp) protein (584aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-) id=14627306 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
13_1_40cm_4_scaffold_2588_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10749..12386)
DNA (1638bp) protein (546aa)
hypothetical protein; K06890 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Thiamine pyrophosphate enzyme id=2783151 bin=GWF2_Methylomirabilis_70_14 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_2588_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12570..13403
DNA (834bp) protein (278aa)
High-affinity nickel-transporter n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G575_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:AHY52647.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
high-affinity nickel-transporter
13_1_40cm_4_scaffold_2588_14
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13420..14439)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248C4FD
Uncharacterized protein {ECO:0000313|EMBL:KJB96523.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
hypothetical protein
13_1_40cm_4_scaffold_2588_15
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14436..15677)
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036EA60E
Uncharacterized protein {ECO:0000313|EMBL:AHY52649.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
hypothetical protein
13_1_40cm_4_scaffold_2588_16
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15761..16135)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KJB96525.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
Displaying 16 items

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