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13_1_40cm_4_scaffold_268

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_268_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

128..661
DNA (534bp) protein (178aa)
ppiB; peptidylprolyl isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=GWA2_Rokubacteria_73_35_curated
Peptidyl-prolyl cis-trans isomerase id=2315334 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidyl-prolyl cis-trans isomerase
13_1_40cm_4_scaffold_268_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

673..1107
DNA (435bp) protein (145aa)
Peptidyl-prolyl cis-trans isomerase id=2315332 bin=GWA2_Methylomirabilis_73_35 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidyl-prolyl cis-trans isomerase Tax=GWA2_Rokubacteria_73_35_curated
peptidyl-prolyl cis-trans isomerase
13_1_40cm_4_scaffold_268_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1112..2710
DNA (1599bp) protein (533aa)
N-acyl-D-amino-acid deacylase (EC:3.5.1.81); K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dihydroorotase (EC:3.5.2.3)
d-aminoacylase id=2315330 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_268_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2713..4107
DNA (1395bp) protein (465aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase id=2315328 bin=GWA2_Methylomirabilis_73_35 species=Megasphaera micronuciformis genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arnT; undecaprenyl phosphate--lipid A 4-amino-4-deoxy-L-arabinose transferase Tax=GWA2_Rokubacteria_73_35_curated
glycosyl transferase family 39
13_1_40cm_4_scaffold_268_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

4137..5582
DNA (1446bp) protein (482aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Aldehyde Dehydrogenase id=1250363 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
NAD-dependent aldehyde dehydrogenase
13_1_40cm_4_scaffold_268_6
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5626..5826
DNA (201bp) protein (67aa)
Alpha/beta hydrolase fold n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TYR9_9BRAD
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CCE11607.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
Alpha/beta hydrolase fold protein
13_1_40cm_4_scaffold_268_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5906..6742
DNA (837bp) protein (279aa)
ABC-type tungstate transport system permease component-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type tungstate transport system permease component-like protein id=2315320 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type tungstate transport system permease component-like protein
13_1_40cm_4_scaffold_268_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6739..7434
DNA (696bp) protein (232aa)
binding-protein-dependent transporters inner membrane component; K05773 tungstate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type tungstate transport permease protein id=2315318 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type tungstate transport permease protein
13_1_40cm_4_scaffold_268_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7434..8192
DNA (759bp) protein (253aa)
putative ABC transporter substrate binding protein; K02020 molybdate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative ABC transporter substrate binding protein; K02020 molybdate transport system substrate-binding protein id=14626699 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
molybdenum ABC transporter molybdenum-binding protein
13_1_40cm_4_scaffold_268_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

8195..8848
DNA (654bp) protein (218aa)
ABC transporter permease; K02018 molybdate transport system permease protein id=14626700 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease; K02018 molybdate transport system permease protein Tax=CSP1_6_Rokubacteria
ABC transporter permease
13_1_40cm_4_scaffold_268_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8853..9971
DNA (1119bp) protein (373aa)
putative ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29] id=14626702 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_268_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9968..11065
DNA (1098bp) protein (366aa)
Tungsten transporter ATP binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tungsten transporter ATP binding protein id=3639789 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tungsten transporter ATP binding protein
13_1_40cm_4_scaffold_268_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11222..11443
DNA (222bp) protein (74aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626705 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_268_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11469..11996
DNA (528bp) protein (176aa)
moaC; molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
moaC; molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C id=14626706 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
moaC; molybdenum cofactor biosynthesis protein C
13_1_40cm_4_scaffold_268_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11993..13123
DNA (1131bp) protein (377aa)
histone deacetylase/AcuC/AphA family protein id=14626707 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
histone deacetylase/AcuC/AphA family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
histone deacetylase/AcuC/AphA family protein
13_1_40cm_4_scaffold_268_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13391..14035)
DNA (645bp) protein (215aa)
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=U3GKE9_SINAD
hypothetical protein
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems {ECO:0000313|EMBL:AGA24985.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia;
13_1_40cm_4_scaffold_268_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14039..15250)
DNA (1212bp) protein (404aa)
56kDa selenium binding protein (SBP56) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8N0_SINAD
56kDa selenium binding protein (SBP56)
56kDa selenium binding protein (SBP56) {ECO:0000313|EMBL:AGA24986.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sin
13_1_40cm_4_scaffold_268_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15379..15999
DNA (621bp) protein (207aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase id=4657189 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_268_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15989..16876
DNA (888bp) protein (296aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta prime subunit id=4657188 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_268_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16884..17741
DNA (858bp) protein (286aa)
putative PSP1-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tpl protein id=14626710 bin=bin7_NC10_sister species=Shuttleworthia satelles genus=Shuttleworthia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
PSP1 domain-containing protein
13_1_40cm_4_scaffold_268_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


17800..19608
DNA (1809bp) protein (603aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=GWC2_Rokubacteria_70_16_curated
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase id=4367870 bin=GWC2_Methylomirabilis_70_16 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_268_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

19614..19844
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=4657184 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_268_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19844..20875
DNA (1032bp) protein (344aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4657183 bin=GWA2_Methylomirabilis_73_35 species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_268_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20872..21648
DNA (777bp) protein (259aa)
TatD family deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Magnesium-dependent deoxyribonuclease, TatD family, and radical SAM domain iron-sulfur oxidoreductase id=4367866 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hydrolase, tatd family
13_1_40cm_4_scaffold_268_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21775..22587
DNA (813bp) protein (271aa)
aminopeptidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase id=4029897 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aminopeptidase
13_1_40cm_4_scaffold_268_26
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(22617..22931)
DNA (315bp) protein (105aa)
id=14628098 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
id=14628098 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_268_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

22973..25270
DNA (2298bp) protein (766aa)
carbon monoxide dehydrogenase (EC:1.2.99.2) Tax=GWC2_Rokubacteria_70_16_curated
carbon monoxide dehydrogenase (EC:1.2.99.2)
carbon monoxide dehydrogenase id=14628099 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_268_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25370..26650
DNA (1281bp) protein (427aa)
homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Homogentisate 1,2-dioxygenase id=4840543 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_268_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

26650..27645
DNA (996bp) protein (332aa)
Luciferase-like, subgroup id=4762328 bin=GWC2_Methylomirabilis_70_24 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
luciferase-like protein Tax=GWA2_Rokubacteria_70_23_curated
luciferase-like protein
13_1_40cm_4_scaffold_268_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

27706..28587
DNA (882bp) protein (294aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4029904 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying items 1-30 of 42 in total

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