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13_1_40cm_4_scaffold_2847

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2847_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..1134)
DNA (1134bp) protein (378aa)
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5) id=14625178 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
carB; carbamoyl phosphate synthase large subunit
13_1_40cm_4_scaffold_2847_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1999..2265)
DNA (267bp) protein (89aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4530407 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2847_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2273..3397)
DNA (1125bp) protein (375aa)
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) id=14625175 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
carA; carbamoyl phosphate synthase small subunit
13_1_40cm_4_scaffold_2847_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3394..4668)
DNA (1275bp) protein (425aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase id=4530400 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2847_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4811..5275)
DNA (465bp) protein (155aa)
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2) id=14625173 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2)
13_1_40cm_4_scaffold_2847_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5971..6534)
DNA (564bp) protein (188aa)
PyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RI
PyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR id=4792710 bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_2847_7
unknown

Not on your lists

comp(6576..6761)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_4_scaffold_2847_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6912..8174)
DNA (1263bp) protein (421aa)
atzC; amidohydrolase family protein (EC:3.5.99.4)
Amidohydrolase id=2085174 bin=GWA2_Methylomirabilis_73_35 species=Enterococcus faecalis genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase family protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_2847_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8178..8705)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00035D2EFF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_40cm_4_scaffold_2847_10
bacterium UASB14, Bacteria

Not on your lists

comp(8720..9772)
DNA (1053bp) protein (351aa)
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:GAK54745.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
13_1_40cm_4_scaffold_2847_11
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9877..10872)
DNA (996bp) protein (332aa)
Polysaccharide deacetylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF79_9PROT
polysaccharide deacetylase Tax=RBG_13_Deltaproteobacteria_49_15_curated
polysaccharide deacetylase
13_1_40cm_4_scaffold_2847_12
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10869..12266)
DNA (1398bp) protein (466aa)
putative adenylate/guanylate cyclase Tax=GWD2_Desulfuromonadales_61_12_curated
Uncharacterized protein id=1871483 bin=GWB2_Proteobacteria_55_19 species=Alcanivorax pacificus genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
adenylate and guanylate cyclase catalytic domain-containing protein
13_1_40cm_4_scaffold_2847_13
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12350..13015)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QWJ9_MYCS2
Glycine cleavage system protein T (Aminomethyltransferase) {ECO:0000313|EMBL:CDO26302.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="M
Urea carboxylase-related aminomethyltransferase
13_1_40cm_4_scaffold_2847_14
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12988..13122)
DNA (135bp) protein (45aa)
oxidoreductase n=1 Tax=Paracoccus sp. N5 RepID=UPI00036E3D42
Uncharacterized protein {ECO:0000313|EMBL:ETW98717.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
oxidoreductase
13_1_40cm_4_scaffold_2847_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13119..14003)
DNA (885bp) protein (295aa)
carbamate kinase (EC:2.7.2.2); K00926 carbamate kinase [EC:2.7.2.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
carbamate kinase (EC:2.7.2.2)
Carbamate kinase id=4792718 bin=GWC2_Methylomirabilis_70_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_2847_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14047..15459)
DNA (1413bp) protein (471aa)
Putative uncharacterized protein id=2085282 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_2847_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15863..17338)
DNA (1476bp) protein (492aa)
protein FdrA; K02381 FdrA protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protein fdrA id=4880216 bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
protein fdrA
13_1_40cm_4_scaffold_2847_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17421..18779)
DNA (1359bp) protein (453aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=2085290 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=GWA2_Rokubacteria_73_35_curated
Fis family transcriptional regulator
13_1_40cm_4_scaffold_2847_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18787..21024)
DNA (2238bp) protein (746aa)
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Sensor histidine kinase, HAMP and PAS domain-containing id=3102546 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_2847_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(21024..21563)
DNA (540bp) protein (180aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2287876 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 20 items

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