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13_1_40cm_4_scaffold_2974

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2974_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2..550
DNA (549bp) protein (183aa)
F0F1 ATP synthase subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ATP synthase delta chain (EC:3.6.3.14)
ATP synthase subunit delta id=2324962 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2974_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

891..1196
DNA (306bp) protein (102aa)
5-oxoprolinase (ATP-hydrolyzing) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
5-oxoprolinase (ATP-hydrolyzing) id=4771371 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_2974_trna_5
unknown

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comp(1213..1285)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_2974_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1566..1802
DNA (237bp) protein (79aa)
Uncharacterized protein conserved in bacteria Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_2974_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2290..2889)
DNA (600bp) protein (200aa)
recombination protein RecR; K06187 recombination protein RecR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Recombination protein RecR id=3441766 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
recombination protein RecR
13_1_40cm_4_scaffold_2974_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2890..3204)
DNA (315bp) protein (105aa)
hypothetical protein; K09747 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Nucleoid-associated protein N47_H23170 id=4677235 bin=GWC2_Methylomirabilis_70_16 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nucleoid-associated protein
13_1_40cm_4_scaffold_2974_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3201..4892)
DNA (1692bp) protein (564aa)
DNA polymerase III subunits gamma/tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA polymerase III, subunits gamma and tau id=5017006 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dnaX; DNA polymerase III subunits gamma and tau
13_1_40cm_4_scaffold_2974_trna_4
unknown

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comp(5182..5271)
DNA (90bp)
transferRNA
13_1_40cm_4_scaffold_2974_trna_3
unknown

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comp(5317..5408)
DNA (92bp)
transferRNA
13_1_40cm_4_scaffold_2974_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5417..5881)
DNA (465bp) protein (155aa)
tRNA-specific adenosine deaminase (EC:3.5.4.-)
CMP/dCMP deaminase zinc-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
CMP/dCMP deaminase zinc-binding protein id=5017005 bin=GWA2_Methylomirabilis_73_35 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2974_trna_2
unknown

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comp(6036..6109)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_2974_trna_1
unknown

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comp(6114..6205)
DNA (92bp)
transferRNA
13_1_40cm_4_scaffold_2974_8
RLO_PLX_64_10, Bacteria

Not on your lists

comp(6357..7205)
DNA (849bp) protein (283aa)
ABC transporter; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein id=24488488 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
binding-protein-dependent transport system inner membrane protein
13_1_40cm_4_scaffold_2974_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(7207..8151)
DNA (945bp) protein (315aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1J9_SPHTD
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ38116.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales
13_1_40cm_4_scaffold_2974_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(8155..9684)
DNA (1530bp) protein (510aa)
Extracellular solute-binding protein family 5 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1K0_SPHTD
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACZ38117.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae;
13_1_40cm_4_scaffold_2974_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9788..10420)
DNA (633bp) protein (211aa)
Putative uncharacterized protein id=4346481 bin=GWC2_Methylomirabilis_70_24 species=Colwellia psychrerythraea genus=Colwellia taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_2974_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10567..11244
DNA (678bp) protein (226aa)
nitroreductase Tax=GWA2_Rokubacteria_70_23_curated
Nitroreductase id=4255947 bin=GWC2_Methylomirabilis_70_16 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nitroreductase
13_1_40cm_4_scaffold_2974_13
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11189..11731)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X1A1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY55524.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
13_1_40cm_4_scaffold_2974_14
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11842..12093
DNA (252bp) protein (84aa)
Acyl carrier protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5E1N6_9GAMM
Acyl carrier protein {ECO:0000313|EMBL:ESS73471.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus
13_1_40cm_4_scaffold_2974_15
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

12153..13418
DNA (1266bp) protein (422aa)
Putative uncharacterized protein id=3838785 bin=GWC2_Nitrospirae_57_13 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
13_1_40cm_4_scaffold_2974_16
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

13415..14593
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI0003669E5E
hypothetical protein Tax=GWC2_Nitrospirae_57_9_curated
FAD dependent oxidoreductase
13_1_40cm_4_scaffold_2974_17
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

14601..16082
DNA (1482bp) protein (494aa)
menE; 2-succinylbenzoate-CoA ligase MenE (EC:6.2.1.26) Tax=GWC2_Nitrospirae_57_13_curated
Putative uncharacterized protein id=1834817 bin=GWD2_Nitrospirae-related_57_8 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
acyl-CoA synthetase
13_1_40cm_4_scaffold_2974_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16089..17423
DNA (1335bp) protein (445aa)
Monooxygenase FAD-binding n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW95_9BACT
Monooxygenase FAD-binding {ECO:0000313|EMBL:EDY21687.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
tryptophan halogenase
13_1_40cm_4_scaffold_2974_19
unknown

Not on your lists

comp(17722..17889)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_2974_20
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(18427..18747)
DNA (321bp) protein (107aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Putative uncharacterized protein id=4400765 bin=GWF2_Methylomirabilis_70_14 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying 25 items

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