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13_1_40cm_4_scaffold_2999

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2999_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..239)
DNA (237bp) protein (79aa)
protein of unknown function DUF81 Tax=GWC2_Rokubacteria_70_16_curated
Putative uncharacterized protein id=4766447 bin=GWC2_Methylomirabilis_70_16 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_2999_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(287..3193)
DNA (2907bp) protein (969aa)
glpC; D-lactate dehydrogenase (cytochrome) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glr3436 protein id=3830908 bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase
13_1_40cm_4_scaffold_2999_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3212..3715
DNA (504bp) protein (168aa)
Thiol-disulfide isomerase and thioredoxins Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiol-disulfide isomerase and thioredoxins id=3830905 bin=GWF2_Methylomirabilis_70_14 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
redoxin
13_1_40cm_4_scaffold_2999_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3712..5016)
DNA (1305bp) protein (435aa)
Natural resistance-associated macrophage protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SI9_SOLUE
natural resistance-associated macrophage protein
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:ABJ87381.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
13_1_40cm_4_scaffold_2999_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5050..6012)
DNA (963bp) protein (321aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transcriptional repressor; K00845 glucokinase [EC:2.7.1.2] id=14627250 bin=bin7_NC10_sister species=Shinella zoogloeoides genus=Shinella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
NagC; transcriptional regulator/sugar kinase
13_1_40cm_4_scaffold_2999_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6079..6783)
DNA (705bp) protein (235aa)
YdjC-like protein; K03478 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
YdjC-like protein id=3269465 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_2999_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6819..7514)
DNA (696bp) protein (232aa)
Methylase id=3269468 bin=GWA2_Methylomirabilis_73_35 species=Methanothermobacter marburgensis genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methyltransferase Tax=GWA2_Rokubacteria_73_35_curated
methylase
13_1_40cm_4_scaffold_2999_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7511..7822)
DNA (312bp) protein (104aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=3269471 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2999_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7950..8069)
DNA (120bp) protein (40aa)
id=3824558 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=3824558 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_2999_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8135..8335)
DNA (201bp) protein (67aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=3269477 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2999_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8332..8601)
DNA (270bp) protein (90aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=3269477 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2999_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8619..11207)
DNA (2589bp) protein (863aa)
helicase Tax=GWA2_Rokubacteria_73_35_curated
Putative helicase id=3914659 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
helicase
13_1_40cm_4_scaffold_2999_13
unknown

Not on your lists

comp(11709..12521)
DNA (813bp) protein (271aa)

This feature has no annotations

13_1_40cm_4_scaffold_2999_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

12559..12831
DNA (273bp) protein (91aa)
TM2 domain-containing protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
TM2 domain-containing protein id=14429358 bin=bin3_NC10 species=Paenibacillus sp. A9 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
13_1_40cm_4_scaffold_2999_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13439..13894)
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=4677000 bin=GWF2_Methylomirabilis_70_14 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_4_scaffold_2999_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14082..15215)
DNA (1134bp) protein (378aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3960244 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_2999_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

15323..16654
DNA (1332bp) protein (444aa)
pyridoxal-phosphate dependent TrpB-like enzyme; K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
pyridoxal-phosphate dependent TrpB-like enzyme; K06001 tryptophan synthase beta chain [EC:4.2.1.20] id=14627587 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
pyridoxal-phosphate dependent TrpB-like enzyme
Displaying 17 items

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