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13_1_40cm_4_scaffold_3072

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3072_1
unknown

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comp(2..292)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_3072_2
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(417..1445)
DNA (1029bp) protein (343aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
13_1_40cm_4_scaffold_3072_3
unknown

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comp(1680..1847)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_3072_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2121..2387)
DNA (267bp) protein (89aa)
Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_3072_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(2384..3802)
DNA (1419bp) protein (473aa)
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8); K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Indolepyruvate ferredoxin oxidoreductase id=3986305 bin=GWA2_Methylomirabilis_73_35 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
indolepyruvate ferredoxin oxidoreductase
13_1_40cm_4_scaffold_3072_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3887..5854)
DNA (1968bp) protein (656aa)
2-oxoacid ferredoxin oxidoreductase; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
2-oxoacid ferredoxin oxidoreductase (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase id=3986305 bin=GWA2_Methylomirabilis_73_35 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_3072_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5906..6853
DNA (948bp) protein (316aa)
luciferase-like monooxygenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative oxidoreductase id=4192663 bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like monooxygenase
13_1_40cm_4_scaffold_3072_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7396..7881)
DNA (486bp) protein (162aa)
nuclease; K01174 micrococcal nuclease [EC:3.1.31.1] Tax=GWA2_Rokubacteria_73_35_curated
Thermonuclease id=3986306 bin=GWA2_Methylomirabilis_73_35 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
micrococcal nuclease-like protein
13_1_40cm_4_scaffold_3072_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7962..8192)
DNA (231bp) protein (77aa)
hypothetical protein; K06962 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3986310 bin=GWA2_Methylomirabilis_73_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_3072_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(8469..9224)
DNA (756bp) protein (252aa)
beta-lactamase class B id=14627174 bin=bin7_NC10_sister species=Amycolatopsis balhimycina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
beta-lactamase class B Tax=CSP1_6_Rokubacteria
beta-lactamase class B
13_1_40cm_4_scaffold_3072_11
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9287..9703)
DNA (417bp) protein (139aa)
nucleic acid-binding protein, contains PIN domain Tax=RBG_16_Deltaproteobacteria_50_11_curated
PilT protein id=3437284 bin=GWC2_Methylomirabilis_70_24 species=Leptospira sp. B5-022 genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
twitching motility protein PilT
13_1_40cm_4_scaffold_3072_12
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9703..9957)
DNA (255bp) protein (85aa)
Conserved domain protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
Conserved domain protein id=3437282 bin=GWC2_Methylomirabilis_70_24 species=Leptospira sp. B5-022 genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_4_scaffold_3072_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10064..11104)
DNA (1041bp) protein (347aa)
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC:2.1.1.14)
Methionine synthase II (Cobalamin-independent) id=2413349 bin=GWA2_Methylomirabilis_73_35 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_3072_14
unknown

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comp(11123..11383)
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 14 items

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