ggKbase home page

13_1_40cm_4_scaffold_3366

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3366_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1296..2102
DNA (807bp) protein (269aa)
respiratory-chain NADH dehydrogenase subunit 1; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
NADH-quinone oxidoreductase subunit H id=3051779 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
respiratory-chain NADH dehydrogenase subunit 1
13_1_40cm_4_scaffold_3366_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2134..2664
DNA (531bp) protein (177aa)
NADH-quinone oxidoreductase subunit i (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] id=14626927 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NADH-quinone oxidoreductase subunit i (EC:1.6.99.5)
13_1_40cm_4_scaffold_3366_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2661..3149
DNA (489bp) protein (163aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
NAD(P)H-quinone oxidoreductase chain 6 (NAD(P)H dehydrogenase I, chain 6) (NDH-1, chain 6) id=3051773 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
proton-translocating NADH-quinone oxidoreductase subunit J
13_1_40cm_4_scaffold_3366_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3149..3457
DNA (309bp) protein (103aa)
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
NADH-quinone oxidoreductase subunit K id=3738931 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADH-ubiquinone oxidoreductase subunit 4L
13_1_40cm_4_scaffold_3366_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3462..5288
DNA (1827bp) protein (609aa)
proton-translocating NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
proton-translocating NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] id=14626924 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase subunit L
13_1_40cm_4_scaffold_3366_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5285..6814
DNA (1530bp) protein (510aa)
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] id=14626923 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5)
13_1_40cm_4_scaffold_3366_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6811..8220
DNA (1410bp) protein (470aa)
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] id=14626922 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5)
13_1_40cm_4_scaffold_3366_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8267..8851
DNA (585bp) protein (195aa)
dienelactone hydrolase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
carboxymethylenebutenolidase (EC:3.1.1.45)
Putative carboxymethylenebutenolidase (Dienelactone hydrolase) (Tat pathway signal) n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7C8D3_METED
13_1_40cm_4_scaffold_3366_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9064..9258
DNA (195bp) protein (65aa)
TetR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, TetR family id=4197919 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
TetR family transcriptional regulator
Displaying 9 items

View Taxonomy