ggKbase home page

13_1_40cm_4_scaffold_3488

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3488_1
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

2..178
DNA (177bp) protein (59aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=24524921 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
peptide methionine sulfoxide reductase
13_1_40cm_4_scaffold_3488_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

188..925
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4C0_9CHLR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_4_scaffold_3488_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

1223..2206
DNA (984bp) protein (328aa)
allantoinase; K01466 allantoinase [EC:3.5.2.5] Tax=RBG_16_RIF_WS3X_71_46_curated
Allantoinase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CMI8_MYXFH
allantoinase
13_1_40cm_4_scaffold_3488_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2194..3201
DNA (1008bp) protein (336aa)
alc; bifunctional allantoicase/OHCU decarboxylase (EC:3.5.3.4)
Probable allantoicase {ECO:0000256|HAMAP-Rule:MF_00813}; EC=3.5.3.4 {ECO:0000256|HAMAP-Rule:MF_00813, ECO:0000313|EMBL:CAN96040.1};; Allantoate amidinohydrolase {ECO:0000256|HAMAP-Rule:MF_00813}; TaxI
Probable allantoicase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBG2_SORC5
13_1_40cm_4_scaffold_3488_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3262..3777
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QJ21_9DELT
2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) decarboxylase {ECO:0000313|EMBL:AKF09419.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sand
OHCU decarboxylase
13_1_40cm_4_scaffold_3488_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3774..4112
DNA (339bp) protein (113aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037670A2
hydroxyisourate hydrolase
13_1_40cm_4_scaffold_3488_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4124..5326
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JNP4_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EIK54084.1}; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutze
hypothetical protein
13_1_40cm_4_scaffold_3488_8
unknown

Not on your lists

5341..6705
DNA (1365bp) protein (455aa)

This feature has no annotations

13_1_40cm_4_scaffold_3488_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6715..7545)
DNA (831bp) protein (277aa)
FAD-binding molybdopterin dehydrogenase protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FAD-binding molybdopterin dehydrogenase protein
FAD-binding molybdopterin dehydrogenase protein id=14629627 bin=bin8_Chloro species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin8_Chloro organism_group=Chloroflexi
13_1_40cm_4_scaffold_3488_10
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7542..8006)
DNA (465bp) protein (155aa)
(2Fe-2S)-binding domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJT8_HALO1
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ACY18445.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Ha
13_1_40cm_4_scaffold_3488_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8006..8965)
DNA (960bp) protein (320aa)
Putative xanthine dehydrogenase n=1 Tax=uncultured bacterium 66 RepID=E3T662_9BACT
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Xanthine dehydrogenase
Displaying 11 items

View Taxonomy