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13_1_40cm_4_scaffold_4152

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4152_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2..208
DNA (207bp) protein (69aa)
pyridoxal-phosphate dependent TrpB-like enzyme; K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=GWA2_Rokubacteria_73_35_curated
Tryptophan synthase beta chain id=3960243 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tryptophan synthase subunit beta
13_1_40cm_4_scaffold_4152_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

218..1219
DNA (1002bp) protein (334aa)
quaternary amine uptake ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein id=14627586 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
quaternary amine uptake ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
quaternary amine uptake ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_4152_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1216..1974
DNA (759bp) protein (253aa)
ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit id=3960241 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrate/sulfonate/bicarbonate ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
nitrate/sulfonate/bicarbonate ABC transporter permease
13_1_40cm_4_scaffold_4152_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2332..2670
DNA (339bp) protein (113aa)
ABC transporter, ATP-binding protein id=3960160 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_4152_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2764..3177)
DNA (414bp) protein (138aa)
id=14627740 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_4_scaffold_4152_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3179..3382)
DNA (204bp) protein (68aa)
id=14627741 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_4_scaffold_4152_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3595..5310
DNA (1716bp) protein (572aa)
Adenylate/guanylate cyclase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DTG4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETW92716.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
adenylate/guanylate cyclase
13_1_40cm_4_scaffold_4152_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5307..6374
DNA (1068bp) protein (356aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Hydrolase, carbon-nitrogen family id=3960157 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Providencia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase
13_1_40cm_4_scaffold_4152_9
unknown

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comp(6498..6641)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_4_scaffold_4152_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6818..7693)
DNA (876bp) protein (292aa)
putative glycosyl transferase, family 9 (EC:2.4.-.-) Tax=GWA2_Rokubacteria_73_35_curated
Putative Glycosyl transferase, family 9 id=3960148 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative glycosyltransferase
13_1_40cm_4_scaffold_4152_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7735..8493)
DNA (759bp) protein (253aa)
histidinol-phosphate phosphatase; K05602 histidinol-phosphatase [EC:3.1.3.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
inositol-phosphate phosphatase (EC:3.1.3.25)
histidinol-phosphate phosphatase, putative id=3960146 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_4152_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8493..8897)
DNA (405bp) protein (135aa)
Predicted 4-carboxymuconolactone decarboxylase id=3960144 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein
13_1_40cm_4_scaffold_4152_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8894..9340)
DNA (447bp) protein (149aa)
esterase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Esterase EstC, putative id=3960142 bin=GWA2_Methylomirabilis_73_35 species=Pelagibaca bermudensis genus=Pelagibaca taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_4152_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9359..9925)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BTC6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETX06013.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_4_scaffold_4152_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9977..11347
DNA (1371bp) protein (457aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] id=14626970 bin=bin7_NC10_sister species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
13_1_40cm_4_scaffold_4152_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11552..12280)
DNA (729bp) protein (243aa)
Putative Haloacid dehalogenase-like hydrolase domain-containing protein 3 id=3960137 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Haloacid dehalogenase-like hydrolase domain-containing protein 3 Tax=GWA2_Rokubacteria_73_35_curated
Haloacid dehalogenase-like hydrolase domain-containing protein 3
13_1_40cm_4_scaffold_4152_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12385..12756
DNA (372bp) protein (124aa)
Copper resistance protein CopC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Copper resistance protein CopC id=14626965 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
uncharacterized protein
13_1_40cm_4_scaffold_4152_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12764..14725
DNA (1962bp) protein (654aa)
copper resistance D domain-containing protein; K07245 putative copper resistance protein D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cytochrome c, class I id=4166552 bin=GWA2_Methylomirabilis_73_35 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
copper resistance D domain-containing protein
13_1_40cm_4_scaffold_4152_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14861..15061
DNA (201bp) protein (67aa)
Electron transport protein SCO1/SenC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Electron transport protein SCO1/SenC id=4166553 bin=GWA2_Methylomirabilis_73_35 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_4152_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15394..16026
DNA (633bp) protein (211aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Uncharacterized protein id=3202771 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_4152_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

16154..16633
DNA (480bp) protein (160aa)
hypothetical protein id=14626968 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
Displaying 21 items

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