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13_1_40cm_4_scaffold_473

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_473_1
unknown

Not on your lists

375..722
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_4_scaffold_473_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1033..2757
DNA (1725bp) protein (575aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein id=14627504 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_473_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2754..3758)
DNA (1005bp) protein (335aa)
proline racemase (EC:5.1.1.4); K01777 proline racemase [EC:5.1.1.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
proline racemase n=1 Tax=Streptomyces sp. CNQ766 RepID=UPI00036A74CD
proline racemase
13_1_40cm_4_scaffold_473_4
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(3775..5010)
DNA (1236bp) protein (412aa)
Putative dehydrogenase protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZG0_THERP
dehydrogenase
Putative dehydrogenase protein {ECO:0000313|EMBL:ACM05184.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (str
13_1_40cm_4_scaffold_473_5
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5367..6680
DNA (1314bp) protein (438aa)
Thiol oxidoreductase-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022G6_SOLUE
thiol oxidoreductase-like protein Tax=RBG_16_Gamma2_60_9_curated
thiol oxidoreductase-like protein
13_1_40cm_4_scaffold_473_6
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(6714..7301)
DNA (588bp) protein (196aa)
Putative aminomethyltransferase protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYI4_THERP
putative aminomethyltransferase protein
Putative aminomethyltransferase protein {ECO:0000313|EMBL:ACM05758.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium ro
13_1_40cm_4_scaffold_473_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7323..8393)
DNA (1071bp) protein (357aa)
GdhA3; glutamate dehydrogenase/leucine dehydrogenase; K00263 leucine dehydrogenase [EC:1.4.1.9] Tax=GWA2_Rokubacteria_70_23_curated
UPI0003D6644F related cluster n=1 Tax=unknown RepID=UPI0003D6644F
leucine dehydrogenase
13_1_40cm_4_scaffold_473_8
Bacillus vireti, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8411..9172)
DNA (762bp) protein (254aa)
UPI0003D5E210 related cluster n=1 Tax=unknown RepID=UPI0003D5E210
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ETI69033.1}; TaxID=1131730 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus vireti LMG 21834.;"
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_473_9
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9217..9924)
DNA (708bp) protein (236aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W7F0_9CYAN
amino acid ABC transporter ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:AFZ16133.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;
13_1_40cm_4_scaffold_473_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9917..11932)
DNA (2016bp) protein (672aa)
ABC transporter n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000369D95D
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC46380.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
branched-chain amino acid ABC transporter permease/ATP-binding protein
13_1_40cm_4_scaffold_473_11
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11936..12874)
DNA (939bp) protein (313aa)
Inner-membrane translocator n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FZT8_9CYAN
Inner-membrane translocator {ECO:0000313|EMBL:CBN55878.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
inner-membrane translocator
13_1_40cm_4_scaffold_473_12
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12922..14148)
DNA (1227bp) protein (409aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Calothrix sp. PCC 6303 RepID=K9VAY4_9CYAN
amino acid ABC transporter substrate-binding protein
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AFZ04405.1}; Flags: Precursor;; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Cal
13_1_40cm_4_scaffold_473_13
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14412..15878
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003649073
N-methylproline demethylase {ECO:0000313|EMBL:KHJ56160.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamir
NADH:flavin oxidoreductase
13_1_40cm_4_scaffold_473_14
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

15839..16345
DNA (507bp) protein (169aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VZK0_DESAS
NemA; NADH:flavin oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
NADH:flavin oxidoreductase
13_1_40cm_4_scaffold_473_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16398..17231
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Nocardiopsis alkaliphila RepID=UPI00034B93A6
Uncharacterized protein {ECO:0000313|EMBL:ETW94587.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_4_scaffold_473_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17604..19259
DNA (1656bp) protein (552aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=GWA2_Rokubacteria_73_35_curated
Hydantoin utilization protein id=4975504 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hydantoin utilization protein
13_1_40cm_4_scaffold_473_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19256..20887
DNA (1632bp) protein (544aa)
Putative N-methylhydantoinase B id=4534456 bin=GWF2_Methylomirabilis_70_14 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative N-methylhydantoinase B Tax=GWA2_Rokubacteria_73_35_curated
putative N-methylhydantoinase B
13_1_40cm_4_scaffold_473_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

20908..21672
DNA (765bp) protein (255aa)
short-chain dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-ketoacyl-(Acyl-carrier-protein) reductase id=4975506 bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase
13_1_40cm_4_scaffold_473_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21676..22539
DNA (864bp) protein (288aa)
FAD binding domain in molybdopterin dehydrogenase id=4975507 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
(2Fe-2S)-binding domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
molybdopterin dehydrogenase FAD-binding protein
13_1_40cm_4_scaffold_473_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22536..23006
DNA (471bp) protein (157aa)
FAD binding domain in molybdopterin dehydrogenase id=4975507 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
(2Fe-2S)-binding domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
2Fe-2S iron-sulfur cluster binding domain-containing protein
13_1_40cm_4_scaffold_473_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22999..25296
DNA (2298bp) protein (766aa)
aldehyde oxidase (EC:1.17.1.4) Tax=GWA2_Rokubacteria_73_35_curated
aldehyde oxidase (EC:1.17.1.4)
Probable aldehyde oxidase and xanthine dehydrogenase family protein transmembrane id=4975508 bin=GWA2_Methylomirabilis_73_35 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_473_22
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25488..25850
DNA (363bp) protein (121aa)
BNR/Asp-box repeat-containing protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YRG5_9BURK
BNR repeat-like domain protein {ECO:0000313|EMBL:KHD22771.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderi
BNR/Asp-box repeat-containing protein
13_1_40cm_4_scaffold_473_23
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25792..26961
DNA (1170bp) protein (390aa)
BNR/Asp-box repeat protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G5B8_9BURK
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EDT08643.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gr
BNR/Asp-box repeat-containing protein
13_1_40cm_4_scaffold_473_24
unknown

Not on your lists

comp(27245..27385)
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_4_scaffold_473_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(27550..28200)
DNA (651bp) protein (217aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] id=14625693 bin=bin7_NC10_sister species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
13_1_40cm_4_scaffold_473_26
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(28201..29538)
DNA (1338bp) protein (446aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Acetyl-CoA carboxylase, biotin carboxylase id=4614181 bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA carboxylase, biotin carboxylase
13_1_40cm_4_scaffold_473_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(29547..30818)
DNA (1272bp) protein (424aa)
peptidase M, neutral zinc metallopeptidase, zinc-binding site Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tetratricopeptide TPR_2 repeat protein id=4973965 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TPR repeat-containing protein
13_1_40cm_4_scaffold_473_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(30828..31301)
DNA (474bp) protein (158aa)
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=GWA2_Rokubacteria_73_35_curated
accB; acetyl Coa carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein id=14625690 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA carboxylase, biotin carboxyl carrier protein
13_1_40cm_4_scaffold_473_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(31301..31870)
DNA (570bp) protein (190aa)
elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Elongation factor P id=4614254 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
translation elongation factor P
13_1_40cm_4_scaffold_473_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(31877..32506)
DNA (630bp) protein (210aa)
TPR domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tetratricopeptide domain protein id=4614255 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TPR domain-containing protein
Displaying items 1-30 of 39 in total

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