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13_1_40cm_4_scaffold_5400

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5400_1
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..902)
DNA (900bp) protein (300aa)
Putative ABC transporter n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z864_9BRAD
putative ABC transporter
Putative ABC transporter {ECO:0000313|EMBL:BAM89336.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium o
13_1_40cm_4_scaffold_5400_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(935..1864)
DNA (930bp) protein (310aa)
ABC transporter permease protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TJU4_TISMK
ABC transporter permease {ECO:0000313|EMBL:KJB93928.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella ae
ABC transporter permease
13_1_40cm_4_scaffold_5400_3
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1866..2909)
DNA (1044bp) protein (348aa)
Putative simple sugar transport system permease protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TJU5_TISMK
ABC transporter permease {ECO:0000313|EMBL:KJB93929.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella ae
putative ABC transporter (permease protein)
13_1_40cm_4_scaffold_5400_4
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2913..3977)
DNA (1065bp) protein (355aa)
Putative ABC transporter (Substrate-binding protein) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TLL1_9BRAD
Putative ABC transporter (Substrate-binding protein) {ECO:0000313|EMBL:CCE07349.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.
ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_5400_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4041..4559
DNA (519bp) protein (173aa)
conserved protein of unknown function; putative thioesterase domain Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4829157 bin=GWC2_Methylomirabilis_70_16 species=Thalassospira profundimaris genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_5400_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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4556..5839
DNA (1284bp) protein (428aa)
yqjV-like MFS-type transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Uncharacterized protein id=1735155 bin=GWD2_Deltaproteobacteria_55_8 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
yqjV-like MFS-type transporter
13_1_40cm_4_scaffold_5400_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5903..6742
DNA (840bp) protein (280aa)
Phosphogluconate dehydrogenase, NAD-binding id=4829159 bin=GWC2_Methylomirabilis_70_16 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative NAD(P)-binding protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_4_scaffold_5400_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6732..7640)
DNA (909bp) protein (303aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA-formamidopyrimidine glycosylase id=4964310 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA-formamidopyrimidine glycosylase
13_1_40cm_4_scaffold_5400_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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7655..8149
DNA (495bp) protein (165aa)
nitroreductase id=24475226 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
nitroreductase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
nitroreductase-like protein
13_1_40cm_4_scaffold_5400_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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9038..10306
DNA (1269bp) protein (423aa)
oligopeptidase B (EC:3.4.21.83); K01354 oligopeptidase B [EC:3.4.21.83] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein n=1 Tax=uncultured Latescibacteria bacterium RepID=Q2YZV3_9BACT
S9A family peptidase
13_1_40cm_4_scaffold_5400_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10303..11268
DNA (966bp) protein (322aa)
hypothetical protein id=14626958 bin=bin7_NC10_sister species=Metallosphaera cuprina genus=Metallosphaera taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_5400_12
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11265..12653
DNA (1389bp) protein (463aa)
Acid phosphatase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EM99_METSB
acid phosphatase
Acid phosphatase {ECO:0000313|EMBL:ACK51488.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methyloce
13_1_40cm_4_scaffold_5400_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12759..13451
DNA (693bp) protein (231aa)
carboxylesterase (EC:3.1.1.1); K06999 phospholipase/carboxylesterase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Carboxylesterase id=3732186 bin=GWA2_Methylomirabilis_73_35 species=Alcaligenes faecalis genus=Alcaligenes taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carboxylesterase
13_1_40cm_4_scaffold_5400_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13460..15379)
DNA (1920bp) protein (640aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UW21_ROSS1
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
13_1_40cm_4_scaffold_5400_15
unknown

Not on your lists

15718..16101
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_4_scaffold_5400_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16326..16973
DNA (648bp) protein (216aa)
msrA; methionine-s-sulfoxide reductase; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Peptide methionine sulfoxide reductase msrA (EC:1.8.4.11)
methionine sulfoxide reductase A n=1 Tax=Chlorogloeopsis RepID=UPI0002E321B6
13_1_40cm_4_scaffold_5400_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17199..17828)
DNA (630bp) protein (210aa)
hypothetical protein id=14626974 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_40cm_4_scaffold_5400_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17852..19069)
DNA (1218bp) protein (406aa)
Major facilitator superfamily MFS_1 id=4183754 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily MFS_1 Tax=GWA2_Rokubacteria_73_35_curated
major facilitator superfamily MFS_1
13_1_40cm_4_scaffold_5400_19
Leptospira inadai, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19637..20119
DNA (483bp) protein (161aa)
PF03928 domain protein n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0FEY4_9LEPT
PF03928 domain protein {ECO:0000313|EMBL:EQA35362.1}; TaxID=1049790 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira inadai serovar Lyme str. 10.;"
hypothetical protein
13_1_40cm_4_scaffold_5400_20
unknown

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20261..20326
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 20 items

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