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13_1_40cm_4_scaffold_5514

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5514_1
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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129..1337
DNA (1209bp) protein (403aa)
Transposase id=3713085 bin=GWF2_Methylomirabilis_70_14 species=Mesorhizobium sp. STM 4661 genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Transposase {ECO:0000313|EMBL:CCV10615.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
transposase
13_1_40cm_4_scaffold_5514_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(1364..2680)
DNA (1317bp) protein (439aa)
amino acid transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Amino acid/polyamine/organocation transporter, APC superfamily id=4998223 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid transporter
13_1_40cm_4_scaffold_5514_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(2677..2901)
DNA (225bp) protein (75aa)
Putative uncharacterized protein id=4998222 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_40cm_4_scaffold_5514_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(2925..3914)
DNA (990bp) protein (330aa)
malate/L-lactate dehydrogenase; K13574 uncharacterized oxidoreductase [EC:1.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036B7DC9
malate/L-lactate dehydrogenase
13_1_40cm_4_scaffold_5514_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3928..4407)
DNA (480bp) protein (160aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7N1_9CHLR id=1244459 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
hypothetical protein
13_1_40cm_4_scaffold_5514_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4430..5212
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JGS4_ANAD2
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_4_scaffold_5514_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5125..6540)
DNA (1416bp) protein (472aa)
protoporphyrinogen oxidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protoporphyrinogen oxidase id=4998220 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protoporphyrinogen oxidase
13_1_40cm_4_scaffold_5514_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6537..7652)
DNA (1116bp) protein (372aa)
ferrochelatase (EC:4.99.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ferrochelatase (EC:4.99.1.1)
Ferrochelatase id=4998219 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5514_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(7795..8586)
DNA (792bp) protein (264aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uroporphyrinogen decarboxylase id=4216374 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5514_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8724..10394
DNA (1671bp) protein (557aa)
mdlC; benzoylformate decarboxylase (EC:4.1.1.7); K01576 benzoylformate decarboxylase [EC:4.1.1.7] Tax=GWA2_Rokubacteria_73_35_curated
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase id=3713089 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_5514_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10411..11496
DNA (1086bp) protein (362aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3713094 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_5514_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

11496..12263
DNA (768bp) protein (256aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=2521453 bin=GWC2_Methylomirabilis_70_16 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_5514_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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12275..13219
DNA (945bp) protein (315aa)
Luciferase-like monooxygenase id=4216381 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
luciferase-like monooxygenase
13_1_40cm_4_scaffold_5514_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(13208..14170)
DNA (963bp) protein (321aa)
Methyltransferase type 12 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ59_RUBXD
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ABG03319.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubr
13_1_40cm_4_scaffold_5514_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14253..14495
DNA (243bp) protein (81aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
citZ; citrate (si)-synthase (EC:2.3.3.1)
Citrate synthase id=3963832 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 15 items

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