name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_4_scaffold_548_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(2..766)
|
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=14625298 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
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13_1_40cm_4_scaffold_548_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(931..2196)
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dnaA; chromosomal replication initiator protein dnaA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dnaA; chromosomal replication initiator protein dnaA id=14625297 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dnaA; chromosomal replication initiator protein dnaA
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13_1_40cm_4_scaffold_548_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
2503..2991
|
ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5] Tax=GWA2_Rokubacteria_73_35_curated
ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5] id=14625295 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
|
|
13_1_40cm_4_scaffold_548_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
3230..4960
|
Membrane protein insertase YidC id=2324956 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
|
|
13_1_40cm_4_scaffold_548_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
5112..5642
|
glucose inhibited division protein; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=GWA2_Rokubacteria_73_35_curated
Ribosomal RNA small subunit methyltransferase G id=2324957 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glucose inhibited division protein
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13_1_40cm_4_scaffold_548_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
5945..6667
|
chromosome partitioning ATPase Soj; K03496 chromosome partitioning protein Tax=GWA2_Rokubacteria_73_35_curated
Chromosome partitioning ATPase Soj id=2324958 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
|
13_1_40cm_4_scaffold_548_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
6660..7496
|
ParB-like nuclease domain-containing protein; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Chromosome segregation DNA-binding protein id=2324959 bin=GWA2_Methylomirabilis_73_35 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ParB-like nuclease domain-containing protein
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|
13_1_40cm_4_scaffold_548_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
7501..8583
|
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tRNA-specific 2-thiouridylase MnmA id=2324960 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
trmU; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
|
|
13_1_40cm_4_scaffold_548_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
8688..9272
|
Sodium-transporting two-sector ATPase (EC:3.6.3.15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sodium-transporting two-sector ATPase (EC:3.6.3.15)
ATP synthase subunit b id=2324961 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_548_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
9269..9817
|
F0F1 ATP synthase subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATP synthase delta chain (EC:3.6.3.14)
ATP synthase subunit delta id=2324962 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_548_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
9846..11372
|
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14) id=14625286 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14)
|
|
13_1_40cm_4_scaffold_548_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
11373..12251
|
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase gamma chain id=2324964 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
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13_1_40cm_4_scaffold_548_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
12248..13669
|
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase subunit beta id=3212391 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
|
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13_1_40cm_4_scaffold_548_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
13670..14080
|
atpC; ATP synthase subunit epsilon, membrane-bound, F1 sector (EC:3.6.3.14) Tax=GWA2_Rokubacteria_73_35_curated
atpC; ATP synthase subunit epsilon, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase epsilon chain id=3299513 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_548_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
14210..14596
|
Two component transcriptional regulator, winged helix family id=3299511 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Transcriptional regulatory protein yycF Tax=GWA2_Rokubacteria_73_35_curated
OmpR; response regulator
|
|
13_1_40cm_4_scaffold_548_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
14581..15270
|
PAS/PAC sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Diguanylate cyclase with PAS/PAC sensor id=3299509 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
|
13_1_40cm_4_scaffold_548_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
15257..16084
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3299507 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_548_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
16086..17669
|
integral membrane sensor signal transduction histidine kinase; K11357 two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3] Tax=GWA2_Rokubacteria_73_35_curated
Integral membrane sensor signal transduction histidine kinase id=3299505 bin=GWA2_Methylomirabilis_73_35 species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phoR4; alkaline phosphatase synthesis sensor protein
|
|
13_1_40cm_4_scaffold_548_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
17651..17899
|
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3299399 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
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13_1_40cm_4_scaffold_548_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
17899..18174
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14625277 bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
|
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13_1_40cm_4_scaffold_548_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
18171..18746
|
ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-polyprenyl-4-hydroxybenzoate decarboxylase id=2319271 bin=GWA2_Methylomirabilis_73_35 species=Citrobacter freundii genus=Citrobacter taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX
|
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13_1_40cm_4_scaffold_548_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
18759..19505
|
Glycosyltransferase id=2319272 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase Tax=GWA2_Rokubacteria_73_35_curated
family 2 glycosyl transferase
|
|
13_1_40cm_4_scaffold_548_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
19502..20491
|
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Oxidoreductase domain protein id=2319273 bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase domain-containing protein
|
|
13_1_40cm_4_scaffold_548_24
unknown
|
Not on your lists |
20890..21024
|
This feature has no annotations |
|
13_1_40cm_4_scaffold_548_trna_3
unknown
|
Not on your lists |
comp(21139..21222)
|
transferRNA
|
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13_1_40cm_4_scaffold_548_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
21255..21689
|
smpB; SsrA-binding protein; K03664 SsrA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SsrA-binding protein id=4214930 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
smpB; SsrA-binding protein
|
|
13_1_40cm_4_scaffold_548_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
22174..22848
|
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH21_9BACT
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:CDM64161.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas met
HAD-superfamily hydrolase
|
|
13_1_40cm_4_scaffold_548_27
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23095..23472
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000370657D
hypothetical protein Tax=RBG_16_Gamma2_64_11_curated
hypothetical protein
|
|
13_1_40cm_4_scaffold_548_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
23713..25134
|
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) id=14625267 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
|
|
13_1_40cm_4_scaffold_548_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
25141..25872
|
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Ribonuclease PH id=4994649 bin=GWA2_Methylomirabilis_73_35 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribonuclease PH
|