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13_1_40cm_4_scaffold_574

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_574_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(96..1271)
DNA (1176bp) protein (392aa)
peptidase M24 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M24 id=4367559 bin=GWA2_Methylomirabilis_73_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M24
13_1_40cm_4_scaffold_574_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1274..2428)
DNA (1155bp) protein (385aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Pyridine nucleotide-disulfide oxidoreductase dimerization region n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L5Q3_9BACI
13_1_40cm_4_scaffold_574_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2504..2641)
DNA (138bp) protein (46aa)
mercuric reductase; K00520 mercuric reductase [EC:1.16.1.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Mercuric reductase n=1 Tax=Pyrobaculum sp. 1860 RepID=G7VH33_9CREN
mercuric reductase
13_1_40cm_4_scaffold_574_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2663..3016)
DNA (354bp) protein (118aa)
Short-chain dehydrogenase/reductase SDR id=4851650 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
short-chain dehydrogenase/reductase SDR Tax=GWA2_Rokubacteria_70_23_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_574_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3013..3924)
DNA (912bp) protein (304aa)
ParB domain protein nuclease id=4367561 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ParB domain-containing protein nuclease; K03497 chromosome partitioning protein, ParB family Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_574_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3935..4930)
DNA (996bp) protein (332aa)
ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter permease id=3784118 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease
13_1_40cm_4_scaffold_574_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4927..5793)
DNA (867bp) protein (289aa)
ABC transporter permease id=3784117 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
ABC transporter permease
13_1_40cm_4_scaffold_574_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5790..6494)
DNA (705bp) protein (235aa)
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter ATP-binding protein id=4851619 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_574_9
unknown

Not on your lists

comp(6487..6660)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_4_scaffold_574_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6756..7487)
DNA (732bp) protein (244aa)
ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter ATP-binding protein id=4851618 bin=GWC2_Methylomirabilis_70_24 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_574_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7588..8913)
DNA (1326bp) protein (442aa)
ABC transporter ATP-binding protein id=2785121 bin=GWF2_Methylomirabilis_70_14 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_574_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8980..9588)
DNA (609bp) protein (203aa)
Thiol methyltransferase 1-like id=4367562 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus elongatus genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiol methyltransferase 1-like protein Tax=GWA2_Rokubacteria_73_35_curated
thiol methyltransferase
13_1_40cm_4_scaffold_574_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9576..10217)
DNA (642bp) protein (214aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 id=3784006 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HAD family hydrolase Tax=GWC2_Rokubacteria_70_16_curated
HAD family hydrolase
13_1_40cm_4_scaffold_574_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10222..10851)
DNA (630bp) protein (210aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
UPF0637 protein HMPREF1013_00496 id=4262081 bin=GWF2_Methylomirabilis_70_14 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_574_15
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10863..12749)
DNA (1887bp) protein (629aa)
X-Pro dipeptidyl-peptidase domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5R9_SPHTD
X-Pro dipeptidyl-peptidase domain-containing protein rbh
X-Pro dipeptidyl-peptidase domain protein {ECO:0000313|EMBL:ACZ39471.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Spha
13_1_40cm_4_scaffold_574_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12762..13154)
DNA (393bp) protein (131aa)
id=3784004 Tax=GWC2_Rokubacteria_70_16_curated
id=3784004 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cupin domain-containing protein
13_1_40cm_4_scaffold_574_17
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

13370..14731
DNA (1362bp) protein (454aa)
Integrase catalytic subunit Tax=RBG_16_Chloroflexi_64_32_curated
Integrase catalytic subunit id=17266943 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Integrase catalytic subunit
Displaying 17 items

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