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13_1_40cm_4_scaffold_577

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_577_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

179..1252
DNA (1074bp) protein (358aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Myo-inositol-1-phosphate synthase id=4350048 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Myo-inositol-1-phosphate synthase
13_1_40cm_4_scaffold_577_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1254..4010
DNA (2757bp) protein (919aa)
Protein export membrane protein, SecD/SecF family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=2216071 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Protein export membrane protein, SecD/SecF family
13_1_40cm_4_scaffold_577_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4115..4717)
DNA (603bp) protein (201aa)
coenzyme PQQ biosynthesis protein C Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
13_1_40cm_4_scaffold_577_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5207..7096)
DNA (1890bp) protein (630aa)
molybdopterin oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
Putative molybdopterin oxidoreductase id=2216073 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin oxidoreductase
13_1_40cm_4_scaffold_577_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7124..8374
DNA (1251bp) protein (417aa)
Major facilitator superfamily MFS_1 id=4870519 bin=GWC2_Methylomirabilis_70_24 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
major facilitator superfamily protein Tax=GWA2_Rokubacteria_70_23_curated
major facilitator superfamily protein
13_1_40cm_4_scaffold_577_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8388..8690)
DNA (303bp) protein (101aa)
antibiotic biosynthesis monooxygenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625608 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
antibiotic biosynthesis monooxygenase
13_1_40cm_4_scaffold_577_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8683..8958)
DNA (276bp) protein (92aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=2216079 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_577_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9084..9395)
DNA (312bp) protein (104aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2216080 bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_577_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9509..11188
DNA (1680bp) protein (560aa)
malate synthase A (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=GWA2_Rokubacteria_70_23_curated
malate synthase A (EC:2.3.3.9)
Malate synthase id=4870516 bin=GWC2_Methylomirabilis_70_24 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_577_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11391..12152)
DNA (762bp) protein (254aa)
methylmalonyl-CoA epimerase (EC:4.4.1.5); K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lactoylglutathione lyase and related lyases id=2216086 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0200_09I09 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methylmalonyl-CoA epimerase
13_1_40cm_4_scaffold_577_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(12388..13500)
DNA (1113bp) protein (371aa)
hypothetical protein id=14626779 bin=bin7_NC10_sister species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
NADP-dependent oxidoreductase domain protein
13_1_40cm_4_scaffold_577_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13517..15091)
DNA (1575bp) protein (525aa)
copper resistance protein CopC; K07245 putative copper resistance protein D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Copper resistance protein, copD family id=2216089 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium oligotrophicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
copper resistance protein
13_1_40cm_4_scaffold_577_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15101..15457)
DNA (357bp) protein (119aa)
Putative Copper resistance protein, copC family id=4737956 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
copper resistance protein CopC; K07156 Tax=GWA2_Rokubacteria_73_35_curated
copper resistance protein CopC
13_1_40cm_4_scaffold_577_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15454..16485)
DNA (1032bp) protein (344aa)
putative acetyltransferase id=4737960 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
N-acetyltransferase GCN5 Tax=GWA2_Rokubacteria_73_35_curated
N-acetyltransferase GCN5
13_1_40cm_4_scaffold_577_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16482..17330)
DNA (849bp) protein (283aa)
2-hydroxy-3-oxopropionate reductase; K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-hydroxy-3-oxopropionate reductase id=4931803 bin=GWC2_Methylomirabilis_70_16 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-hydroxy-3-oxopropionate reductase
13_1_40cm_4_scaffold_577_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17606..19522)
DNA (1917bp) protein (639aa)
aldehyde:ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldehyde:ferredoxin oxidoreductase id=14626789 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
aldehyde:ferredoxin oxidoreductase
13_1_40cm_4_scaffold_577_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(19519..20865)
DNA (1347bp) protein (449aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=14626790 bin=bin7_NC10_sister species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_4_scaffold_577_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20865..21335)
DNA (471bp) protein (157aa)
Fe-S-cluster-containing hydrogenase components 2 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase id=14626791 bin=bin7_NC10_sister species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase
13_1_40cm_4_scaffold_577_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21332..21649)
DNA (318bp) protein (106aa)
GYD domain superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GYD domain superfamily id=14626792 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
GYD domain superfamily
13_1_40cm_4_scaffold_577_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(21809..22711)
DNA (903bp) protein (301aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase id=3261976 bin=GWA2_Methylomirabilis_73_35 species=Rhipicephalus pulchellus genus=Rhipicephalus taxon_order=Ixodida taxon_class=Arachnida phylum=Arthropoda tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-hydroxyisobutyrate dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_577_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22746..23399)
DNA (654bp) protein (218aa)
Cyclase family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZZ4_PSEUX
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
cyclase
13_1_40cm_4_scaffold_577_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23396..23812)
DNA (417bp) protein (139aa)
Phenylacetic acid degradation-related protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX48_RHOP2
phenylacetic acid degradation-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
phenylacetic acid degradation-like protein
13_1_40cm_4_scaffold_577_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23842..24714
DNA (873bp) protein (291aa)
membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Membrane protein, putative id=4365892 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_4_scaffold_577_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24765..25805)
DNA (1041bp) protein (347aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3560948 bin=GWC2_Methylomirabilis_70_24 species=Natrialba asiatica genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_4_scaffold_577_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26048..26335)
DNA (288bp) protein (96aa)
selenoprotein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3814678 bin=GWA2_Methylomirabilis_73_35 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_577_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26366..26587)
DNA (222bp) protein (74aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3814680 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_577_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

26617..28062
DNA (1446bp) protein (482aa)
carbohydrate kinase FGGY; K00851 gluconokinase [EC:2.7.1.12] Tax=GWA2_Rokubacteria_73_35_curated
carbohydrate kinase; K00851 gluconokinase [EC:2.7.1.12] id=14627818 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
carbohydrate kinase
13_1_40cm_4_scaffold_577_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

28122..28865
DNA (744bp) protein (248aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31) Tax=GWA2_Rokubacteria_73_35_curated
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase (6PGL) id=3814683 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_577_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

28869..30962
DNA (2094bp) protein (698aa)
transaldolase; K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] Tax=GWA2_Rokubacteria_73_35_curated
Transaldolase id=3814765 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transaldolase
13_1_40cm_4_scaffold_577_30
unknown

Not on your lists

30962..31162
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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