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13_1_40cm_4_scaffold_587

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_587_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..595)
DNA (594bp) protein (198aa)
Aminotransferase, class I and II id=4815551 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Aminotransferase, class I and II Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_587_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(719..1135)
DNA (417bp) protein (139aa)
id=4143380 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=4143380 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_587_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1278..1655
DNA (378bp) protein (126aa)
methylmalonyl CoA epimerase (EC:5.1.99.1)
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
glyoxalase/bleomycin resistance protein/dioxygenase id=14626134 bin=bin7_NC10_sister species=Pandoraea sp. SD6-2 genus=Pandoraea taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_587_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1720..5283
DNA (3564bp) protein (1188aa)
adenylyl cyclase Tax=GWC2_Rokubacteria_70_16_curated
Adenylyl cyclase class-3/4/guanylyl cyclase:Tetratricopeptide TPR_4 id=4599716 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ATP synthase beta subunit/transription termination factor Rho
13_1_40cm_4_scaffold_587_5
unknown

Not on your lists

comp(5280..5618)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_4_scaffold_587_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5722..7257
DNA (1536bp) protein (512aa)
UbiD-type (de) carboxylyase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UbiD-type (de) carboxylyase-like protein id=14626327 bin=bin7_NC10_sister species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
UbiD-type (de) carboxylyase-like protein
13_1_40cm_4_scaffold_587_7
unknown

Not on your lists

7239..7412
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_4_scaffold_587_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7424..8905
DNA (1482bp) protein (494aa)
UbiD-type (de) carboxylyase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
UbiD-type (de) carboxylyase-like protein id=14626327 bin=bin7_NC10_sister species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
UbiD-type (de) carboxylyase-like protein
13_1_40cm_4_scaffold_587_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

8902..9903
DNA (1002bp) protein (334aa)
hypothetical protein id=14626326 bin=bin7_NC10_sister species=Wenxinia marina genus=Wenxinia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein
13_1_40cm_4_scaffold_587_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9900..10916
DNA (1017bp) protein (339aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein id=14626326 bin=bin7_NC10_sister species=Wenxinia marina genus=Wenxinia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_587_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10913..12838
DNA (1926bp) protein (642aa)
TRAP transporter 4TM/12TM fusion protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
TRAP transporter 4TM/12TM fusion protein id=14626325 bin=bin7_NC10_sister species=Wenxinia marina genus=Wenxinia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
TRAP transporter 4TM/12TM fusion protein
13_1_40cm_4_scaffold_587_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12835..13848
DNA (1014bp) protein (338aa)
amidohydrolase 2 id=14626324 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
amidohydrolase 2 Tax=CSP1_6_Rokubacteria
amidohydrolase 2
13_1_40cm_4_scaffold_587_13
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

14671..15012
DNA (342bp) protein (114aa)
cytochrome P450; K00517 [EC:1.14.-.-] Tax=RBG_16_Chloroflexi_68_14_curated
Cytochrome P450 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVR9_9CHLR
cytochrome P450
13_1_40cm_4_scaffold_587_14
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15292..16350
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQI4_THISH
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
hypothetical protein
13_1_40cm_4_scaffold_587_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16413..18149)
DNA (1737bp) protein (579aa)
Oligopeptide ABC transporter periplasmic oligopeptide-binding protein id=3741107 bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter periplasmic oligopeptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
family 5 extracellular solute-binding protein
13_1_40cm_4_scaffold_587_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(18170..19015)
DNA (846bp) protein (282aa)
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Binding-protein-dependent transport systems inner membrane component id=3741106 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
13_1_40cm_4_scaffold_587_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(19045..19992)
DNA (948bp) protein (316aa)
binding-protein-dependent transport system inner membrane protein; K15581 oligopeptide transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Binding-protein-dependent transport systems inner membrane component id=3980008 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport system inner membrane protein
13_1_40cm_4_scaffold_587_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

20022..20978
DNA (957bp) protein (319aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] id=14626323 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=CSP1_6_Rokubacteria
acetolactate synthase catalytic subunit (EC:2.2.1.6)
Displaying 18 items

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