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13_1_40cm_4_scaffold_6012

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6012_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2..847)
DNA (846bp) protein (282aa)
delta-1-pyrroline-5-carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Delta-1-pyrroline-5-carboxylate dehydrogenase id=4768357 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
delta-1-pyrroline-5-carboxylate dehydrogenase
13_1_40cm_4_scaffold_6012_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1000..1575
DNA (576bp) protein (192aa)
putative lipoprotein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=3660574 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_6012_3
unknown

Not on your lists

1712..1909
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_6012_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2128..3048)
DNA (921bp) protein (307aa)
Nucleotidyl transferase id=14626204 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Nucleotidyl transferase Tax=CSP1_6_Rokubacteria
Nucleotidyl transferase
13_1_40cm_4_scaffold_6012_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3054..3302)
DNA (249bp) protein (83aa)
id=14627932 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_4_scaffold_6012_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3546..4421)
DNA (876bp) protein (292aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Uncharacterized protein id=2119285 bin=GWD2_Deltaproteobacteria_55_8 species=Haloferax elongans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_6012_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

4570..5610
DNA (1041bp) protein (347aa)
DNA repair photolyase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q117_9FIRM id=5225484 bin=16ft_combo_ws3_JS1 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
radical SAM protein Tax=RBG_16_RIF_WS3X_71_46_curated
radical SAM protein
13_1_40cm_4_scaffold_6012_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5799..6095
DNA (297bp) protein (99aa)
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNP-1 like RNA-binding protein id=4283016 bin=GWC2_Methylomirabilis_70_16 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RNP-1 like RNA-binding protein
13_1_40cm_4_scaffold_6012_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6100..6315
DNA (216bp) protein (72aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4327908 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_6012_10
unknown

Not on your lists

6317..6589
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_4_scaffold_6012_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

6608..7195
DNA (588bp) protein (196aa)
id=14626054 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_4_scaffold_6012_12
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7387..7878
DNA (492bp) protein (164aa)
hypothetical protein Tax=RBG_16_Gamma2_64_11_curated
hypothetical protein Magn03010940 id=2513754 bin=GWC2_Methylomirabilis_70_24 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_4_scaffold_6012_13
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7913..8893)
DNA (981bp) protein (327aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase {ECO:0000313|EMBL:ABB06697.1}; EC=4.1.1.68 {ECO:0000313|EMBL:ABB06697.1};; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39LG9_BURS3
13_1_40cm_4_scaffold_6012_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8907..9938)
DNA (1032bp) protein (344aa)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK52_9BACT
alcohol dehydrogenase
alcohol dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
13_1_40cm_4_scaffold_6012_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9935..11149)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030E032F
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_6012_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11175..11885)
DNA (711bp) protein (237aa)
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC-type branched-chain amino acid transport system, ATPase component id=3434010 bin=GWF2_Methylomirabilis_70_14 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
high-affinity branched-chain amino acid ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_6012_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11878..13620)
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000319FA33
branched-chain amino acid ABC transporter permease; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_R
high-affinity branched-chain amino acid ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_6012_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13617..14465)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000372DCD9
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
high-affinity branched-chain amino acid ABC transporter permease protein
13_1_40cm_4_scaffold_6012_19
unknown

Not on your lists

14610..14978
DNA (369bp) protein (123aa)

This feature has no annotations

Displaying 19 items

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