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13_1_40cm_4_scaffold_6652

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6652_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1038
DNA (1038bp) protein (346aa)
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Amidohydrolase id=1757965 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
N-ethylammeline chlorohydrolase
13_1_40cm_4_scaffold_6652_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1069..2112)
DNA (1044bp) protein (348aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64586.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein id=24403996 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
heparan-alpha-glucosaminide N-acetyltransferase
13_1_40cm_4_scaffold_6652_3
unknown

Not on your lists

2190..2429
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_4_scaffold_6652_4
unknown

Not on your lists

comp(2407..2685)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_4_scaffold_6652_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2863..3657)
DNA (795bp) protein (265aa)
enoyl-CoA hydratase (EC:4.2.1.-)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRI0_AFIFE
enoyl-CoA hydratase/isomerase family protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
13_1_40cm_4_scaffold_6652_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3683..4018)
DNA (336bp) protein (112aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Anoxybacillus flavithermus NBRC 109594 RepID=R4FDB7_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ETW96301.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Glyoxalase/bleomycin resistance protein/dioxygenase; K07104
13_1_40cm_4_scaffold_6652_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4494..5516
DNA (1023bp) protein (341aa)
Putative Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10K24 RepID=B3TCG8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ETW93296.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
thiamine pyrophosphate protein
13_1_40cm_4_scaffold_6652_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5584..6162
DNA (579bp) protein (193aa)
sulfoacetaldehyde acetyltransferase (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
sulfoacetaldehyde acetyltransferase (EC:2.2.1.6)
Putative Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain protein id=4947260 bin=GWA2_Methylomirabilis_73_35 species=uncultured marine microorganism HF4000_APKG10K24 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_6652_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6275..7294)
DNA (1020bp) protein (340aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=1782162 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_6652_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7291..8328)
DNA (1038bp) protein (346aa)
putative amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase id=4770810 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
13_1_40cm_4_scaffold_6652_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(8487..8777)
DNA (291bp) protein (97aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) id=14626322 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) Tax=CSP1_6_Rokubacteria
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
13_1_40cm_4_scaffold_6652_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8938..11820
DNA (2883bp) protein (961aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003741C12
nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein {ECO:0000313|EMBL:ABF41374.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candid
13_1_40cm_4_scaffold_6652_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

11860..13752
DNA (1893bp) protein (631aa)
thiamine pyrophosphate binding domain-containing protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Thiamine pyrophosphate binding domain-containing protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CVL2_9BURK
thiamine pyrophosphate binding domain-containing protein
13_1_40cm_4_scaffold_6652_14
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

13770..14123
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V6H4_SPHWW
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_4_scaffold_6652_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14142..14528)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FWV0_9CYAN
aldo/keto reductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
aldo/keto reductase
13_1_40cm_4_scaffold_6652_16
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14583..15464
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GQD0_CUPNN
hypothetical protein; K06889 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
hypothetical protein
13_1_40cm_4_scaffold_6652_17
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15461..16498
DNA (1038bp) protein (346aa)
Malate dehydrogenase n=1 Tax=Frankia sp. CN3 RepID=G6HHY4_9ACTO
Malate/L-lactate dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Bll6274 protein
13_1_40cm_4_scaffold_6652_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16485..16955)
DNA (471bp) protein (157aa)
Glyoxalase/bleomycin resistance protein/dioxygenase id=4141959 bin=GWA2_Methylomirabilis_73_35 species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glyoxalase/bleomycin resistance protein/dioxygenase Tax=GWA2_Rokubacteria_73_35_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_4_scaffold_6652_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16952..17296)
DNA (345bp) protein (115aa)
Putative uncharacterized protein id=4935528 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_4_scaffold_6652_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17364..18338
DNA (975bp) protein (325aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4221494 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
endoribonuclease L-PSP
13_1_40cm_4_scaffold_6652_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18656..19924
DNA (1269bp) protein (423aa)
Putative uncharacterized protein id=4400730 bin=GWF2_Methylomirabilis_70_14 species=uncultured Aminicenantes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA/RNA helicase Tax=GWA2_Rokubacteria_70_23_curated
DEAD/DEAH box helicase domain protein
13_1_40cm_4_scaffold_6652_22
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20100..20975
DNA (876bp) protein (292aa)
xthA; exodeoxyribonuclease III (EC:3.1.11.2) id=14630043 bin=bin8_Chloro species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
xthA; exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III {ECO:0000313|EMBL:AKF09296.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandar
13_1_40cm_4_scaffold_6652_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

20972..21955
DNA (984bp) protein (328aa)
Putative uncharacterized protein id=3995087 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_6652_24
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(21868..22779)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037989E5
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
13_1_40cm_4_scaffold_6652_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22862..24034
DNA (1173bp) protein (391aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TPR repeat id=4221516 bin=GWA2_Methylomirabilis_73_35 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_6652_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24108..26720
DNA (2613bp) protein (871aa)
Putative transmembrane signal transduction receptor and sigma-54 dependent response regulator id=4221518 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transmembrane signal transduction receptor and sigma-54 dependent response regulator Tax=GWA2_Rokubacteria_73_35_curated
putative transmembrane signal transduction receptor and sigma-54 dependent response regulator
13_1_40cm_4_scaffold_6652_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

26884..27309
DNA (426bp) protein (142aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
peptidoglycan-associated (lipo)protein-like protein; K03640 peptidoglycan-associated lipoprotein id=14627755 bin=bin7_NC10_sister species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
omp; Outer membrane lipoprotein omp16 homolog
Displaying 27 items

View Taxonomy