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13_1_40cm_4_scaffold_6461

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6461_1
unknown

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comp(137..790)
DNA (654bp) protein (218aa)

This feature has no annotations

13_1_40cm_4_scaffold_6461_2
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(914..1645)
DNA (732bp) protein (244aa)
Pentapeptide repeat family protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JP58_SYNJB
pentapeptide repeat-containing protein
Pentapeptide repeat family protein {ECO:0000313|EMBL:ABD01437.1}; TaxID=321332 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strai
13_1_40cm_4_scaffold_6461_3
unknown

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comp(1787..1912)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_4_scaffold_6461_4

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comp(2772..3134)
DNA (363bp) protein (121aa)
Marine sediment metagenome DNA, contig: S03H2_C00503 {ECO:0000313|EMBL:GAH21452.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_4_scaffold_6461_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3454..3984)
DNA (531bp) protein (177aa)
integron integrase Tax=GWA2_Rokubacteria_70_23_curated
Putative integron integrase (Fragment) id=4119987 bin=GWF2_Methylomirabilis_70_14 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integron integrase
13_1_40cm_4_scaffold_6461_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4131..5072)
DNA (942bp) protein (314aa)
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=GWA2_Rokubacteria_73_35_curated
methylmalonyl-CoA epimerase (EC:5.1.99.1)
Methylmalonyl-CoA epimerase id=1884746 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_6461_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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5102..6445
DNA (1344bp) protein (448aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component id=14625977 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component Tax=CSP1_6_Rokubacteria
dehydrogenase catalytic domain-containing protein
13_1_40cm_4_scaffold_6461_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(6471..7856)
DNA (1386bp) protein (462aa)
Anion transporter n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WGD9_BURSC
anion transporter; K11106 L-tartrate/succinate antiporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
anion transporter
13_1_40cm_4_scaffold_6461_9
unknown

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7977..8390
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_40cm_4_scaffold_6461_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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8393..9775
DNA (1383bp) protein (461aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=14625975 bin=bin7_NC10_sister species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=CSP1_6_Rokubacteria
dihydrolipoamide dehydrogenase
13_1_40cm_4_scaffold_6461_11
unknown

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comp(9780..10142)
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_40cm_4_scaffold_6461_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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10188..11765
DNA (1578bp) protein (526aa)
Sulfurtransferase id=2642979 bin=GWF2_Methylomirabilis_70_14 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rhodanese-like protein Tax=GWA2_Rokubacteria_70_23_curated
Rhodanese-like protein
Displaying 12 items

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