ggKbase home page

13_1_40cm_4_scaffold_6489

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6489_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2043)
DNA (2043bp) protein (681aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX06569.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
4-hydroxybenzoyl-CoA reductase alpha/gamma subunit (HcrC/hcrA) id=2069111 bin=GWD2_Deltaproteobacteria_55_8 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
carbon monoxide dehydrogenase molybdoprotein family protein
13_1_40cm_4_scaffold_6489_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2040..2435)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9F1_9DELT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
13_1_40cm_4_scaffold_6489_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2515..2763)
DNA (249bp) protein (83aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=14632961 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_4_scaffold_6489_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(2744..3097)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN46_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBE68148.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein
13_1_40cm_4_scaffold_6489_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3110..3592)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034DCBEB
Uncharacterized protein {ECO:0000313|EMBL:KJC45924.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
13_1_40cm_4_scaffold_6489_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3647..4429)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T858_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:KJC59691.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
13_1_40cm_4_scaffold_6489_7
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4740..5369)
DNA (630bp) protein (210aa)
Homoserine/threonine efflux protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NZW4_9DELT
lysine exporter protein LysE/YggA Tax=GWB2_Ignavibacteria_35_6b_curated
homoserine/threonine efflux protein
13_1_40cm_4_scaffold_6489_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5412..6029)
DNA (618bp) protein (206aa)
id=3413114 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=3413114 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_6489_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6166..7152)
DNA (987bp) protein (329aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=1798653 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_6489_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7149..7298)
DNA (150bp) protein (50aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
13_1_40cm_4_scaffold_6489_11
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7301..8749)
DNA (1449bp) protein (483aa)
ubiD2; 4-hydroxybenzoate decarboxylase UbiD (EC:4.1.1.61) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ubiD2; 4-hydroxybenzoate decarboxylase UbiD (EC:4.1.1.61)
3-polyprenyl-4-hydroxybenzoate decarboxylase id=1798648 bin=GWD2_Deltaproteobacteria_55_8 species=Mycobacterium vaccae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_6489_12
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8841..9836
DNA (996bp) protein (332aa)
family 1 extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Extracellular solute-binding protein family 1 id=1937571 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 1 extracellular solute-binding protein
13_1_40cm_4_scaffold_6489_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9844..11541
DNA (1698bp) protein (566aa)
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein id=14631202 bin=bin9_gal15 species=Pseudomonas agarici genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
ABC transporter inner membrane protein
13_1_40cm_4_scaffold_6489_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11725..12597)
DNA (873bp) protein (291aa)
dlhH; carboxymethylenebutenolidase (EC:3.1.1.45) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Dienelactone hydrolase-like enzyme id=2159104 bin=GWD2_Deltaproteobacteria_55_8 species=Mesorhizobium alhagi genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
carboxymethylenebutenolidase
13_1_40cm_4_scaffold_6489_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12708..13775)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BT10_9BACL
ocd2; Ornithine cyclodeaminase 2 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ocd2; Ornithine cyclodeaminase 2
13_1_40cm_4_scaffold_6489_16
unknown

Not on your lists

comp(13824..14315)
DNA (492bp) protein (164aa)

This feature has no annotations

13_1_40cm_4_scaffold_6489_17
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14312..15121)
DNA (810bp) protein (270aa)
integrin-like repeat-containing protein Tax=RBG_13_Deltaproteobacteria_47_9_curated
Integrin-like repeat protein id=3714492 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_4_scaffold_6489_18
unknown

Not on your lists

comp(15835..17166)
DNA (1332bp) protein (444aa)

This feature has no annotations

Displaying 18 items

View Taxonomy