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13_1_40cm_4_scaffold_7451

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7451_1
unknown

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comp(3..170)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_7451_2
unknown

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comp(167..634)
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_40cm_4_scaffold_7451_3
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(696..2567)
DNA (1872bp) protein (624aa)
hypothetical protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000288B4B8
Uncharacterized protein {ECO:0000313|EMBL:EMT52431.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
hypothetical protein
13_1_40cm_4_scaffold_7451_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2737..4371)
DNA (1635bp) protein (545aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Putative uncharacterized protein id=14631201 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
13_1_40cm_4_scaffold_7451_5
unknown

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comp(4405..4539)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_4_scaffold_7451_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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5119..6378
DNA (1260bp) protein (420aa)
Glycosyl transferase group 1 protein n=1 Tax=uncultured bacterium 89 RepID=E3T691_9BACT
glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
group 1 glycosyl transferase
13_1_40cm_4_scaffold_7451_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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6371..7180
DNA (810bp) protein (270aa)
Putative xylanase/chitin deacetylase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMS5_SINAD
xylanase/chitin deacetylase
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:AGA30684.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singu
13_1_40cm_4_scaffold_7451_8
unknown

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comp(7126..7347)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_7451_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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7719..8939
DNA (1221bp) protein (407aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=4781393 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two component sigma54 specific Fis family transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
two component sigma54 specific Fis family transcriptional regulator
13_1_40cm_4_scaffold_7451_10
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8940..10820)
DNA (1881bp) protein (627aa)
Uncharacterized protein id=24578647 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
13_1_40cm_4_scaffold_7451_11

Not on your lists

11070..11423
DNA (354bp) protein (118aa)
Transcription antitermination protein NusG (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BE69_9ZZZZ
Transcription antitermination protein NusG {ECO:0000313|EMBL:EQD71221.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage m
NusG antitermination factor
Displaying 11 items

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