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13_1_40cm_4_scaffold_7719

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7719_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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707..1114
DNA (408bp) protein (136aa)
extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type branched-chain amino acid transport system, periplasmic component id=2475303 bin=GWC2_Methylomirabilis_70_16 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amino acid/amide ABC transporter substrate-binding protein, HAAT family
13_1_40cm_4_scaffold_7719_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1192..1827
DNA (636bp) protein (212aa)
livK; branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
ABC-type branched-chain amino acid transport system, periplasmic component id=2475303 bin=GWC2_Methylomirabilis_70_16 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched-chain amino acid ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_7719_3
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1847..2119
DNA (273bp) protein (91aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) Tax=RBG_16_Gamma2_60_9_curated
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031846E1
13_1_40cm_4_scaffold_7719_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2246..2989)
DNA (744bp) protein (248aa)
ABC transporter related n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P984_METFA
ABC transporter releated protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
nitrate transporter protein CmpC
13_1_40cm_4_scaffold_7719_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2995..3765)
DNA (771bp) protein (257aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Rhodopseudomonas palustris RepID=B3QKN5_RHOPT
inner membrane component of binding-protein-dependent transport system Tax=RBG_16_Betaproteobacteria_64_18_curated
nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
13_1_40cm_4_scaffold_7719_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3762..4421)
DNA (660bp) protein (220aa)
sulfonate ABC transporter permease n=1 Tax=Herbaspirillum lusitanum RepID=UPI000366BAFA
nitrate/sulfonate/bicarbonate ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Taurine transport system permease protein TauC
13_1_40cm_4_scaffold_7719_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4547..5539)
DNA (993bp) protein (331aa)
Exported protein n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KVM9_RHOSK
aliphatic sulfonates family abc transporter, periplasmic ligand-binding protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_cur
exported protein
13_1_40cm_4_scaffold_7719_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5703..6452
DNA (750bp) protein (250aa)
aldo/keto reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
aldo/keto reductase id=14627748 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
aldo/keto reductase
13_1_40cm_4_scaffold_7719_9
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6916..8022
DNA (1107bp) protein (369aa)
Amidohydrolase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQD6_SORCE
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
amidohydrolase
13_1_40cm_4_scaffold_7719_10
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8130..9335
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000368081C
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein
13_1_40cm_4_scaffold_7719_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9346..10599
DNA (1254bp) protein (418aa)
Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Extracellular ligand-binding receptor id=4827657 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor
13_1_40cm_4_scaffold_7719_12
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(10716..12011)
DNA (1296bp) protein (432aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003656D0F
BEC protein
Displaying 12 items

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