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13_1_40cm_4_scaffold_1067_19

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(16300..16854)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein RNP-3 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 184.0
  • Bit_score: 183
  • Evalue 2.10e-43
RNP-1 like RNA-binding protein id=1884756 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 119.0
  • Bit_score: 134
  • Evalue 1.00e-28
RNP-1-like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 183.0
  • Bit_score: 119
  • Evalue 9.80e-25

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGTCCGTGAAGCTGTTCGTCGGAGGCCTCTCGTTCACCACCTCGAACGAGAGCCTGCGCGAGGCGTTCGCACGCTTCGGCACCGTCGCCTCCGCCCTGGTGATGACCGATCGCGAGACCGGTCGCTCGCGTGGCTTCGGGTTCGTGGAGATGTCGACGACCGAGGAGGCGGAGCGCGCCATCAGCGGGCTCAACGGCTCGATGCTCGACGGCCGGGCGATCCGCGTCGACAAGGCAACGCCGCGGGGCGCTCGAGGAACGGCCCCGGCCCGTCGTCCGGGCGGTCCCCCGCCCAGCCGGGGAGGCTTCGGCGGCGGCGGGGGCGGCGGCTTTCCGCCGCGCGGGGGCGGACCCGGAGGCGGCGGGGGTGCCGATCGCCCCTGGGGCGACGCGCGGGGGCCCGGGCGGAGCGGACAGGGTCGCGGCGAGCGTCGCCGCGGGAGCGGTGAGGGGGATCCGCGCCGGCCCGGCGGCCCGCGCCGGGGACGACCGACCAACGAGCGTCGGAGCGACGACAAAGGGCGCCGCGGGGAGGACAGCGGCTACCGCTGGTGA
PROTEIN sequence
Length: 185
MSVKLFVGGLSFTTSNESLREAFARFGTVASALVMTDRETGRSRGFGFVEMSTTEEAERAISGLNGSMLDGRAIRVDKATPRGARGTAPARRPGGPPPSRGGFGGGGGGGFPPRGGGPGGGGGADRPWGDARGPGRSGQGRGERRRGSGEGDPRRPGGPRRGRPTNERRSDDKGRRGEDSGYRW*