ggKbase home page

13_1_40cm_4_scaffold_1803_2

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(382..861)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000311E8CB similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 159.0
  • Bit_score: 257
  • Evalue 9.20e-66
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 159.0
  • Bit_score: 268
  • Evalue 5.60e-69
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 159.0
  • Bit_score: 235
  • Evalue 8.10e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 480
GTGCGCGGCGGCCAGCAGTTCGCCGGCCTCCTCGTGTTTCTCACCGACGTGCATTCGCTCGGTCTCGAGAAGGCGCAGGGGCTGCTCCTCACGGAGTCCTTCTACTGGGATCTCAACGACCAGACCCGCGCCTTCTCCAAGCGCTTCGCCGAGCGCCACCGCGGCGCCATGCCCACGATGGCCCAGGCTGGCGTCTACTCCGCGGTCCTGCATTACTTGAAATCGGTGGAGGCGCTCAAGAGCGACGACGGCCCCAAGGTGATCGCCAAGATGAAGGAGTTACCGACCGACGACCCGGTGTTCGGCAAGGGGCGTGTCCGCCCCGACGGGCGCAAGATCCACCCCGTGTACCTGTTCGAGGTGAAGAAGCCCTCGGAGTCGAAGGGGCCGTGGGATTACTACAAGCTGCGCTCGACCATTCCGGCCGAGCAGGCCTTCCGTCCGATCGACCAGGGCGACTGCCCGCTCGTGAAGAAGTAG
PROTEIN sequence
Length: 160
VRGGQQFAGLLVFLTDVHSLGLEKAQGLLLTESFYWDLNDQTRAFSKRFAERHRGAMPTMAQAGVYSAVLHYLKSVEALKSDDGPKVIAKMKELPTDDPVFGKGRVRPDGRKIHPVYLFEVKKPSESKGPWDYYKLRSTIPAEQAFRPIDQGDCPLVKK*