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13_1_40cm_4_scaffold_18491_2

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: 234..752

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GDD3_PROFC similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 168.0
  • Bit_score: 145
  • Evalue 5.50e-32
RNA polymerase sigma24 factor similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 169.0
  • Bit_score: 149
  • Evalue 6.30e-34
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1661 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 169.0
  • Bit_score: 149
  • Evalue 3.10e-33

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Taxonomy

Trueperella pyogenes → Trueperella → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 519
TTGAGTGGCATAGCGAGCGAGGCGTTGGCTTACGTCGACGCCCTGCACAACCTGGCCCGGTACCTCACGGGTAACGAGACGGACGCCGAGGACCTCGTGCAGGAGACGTATGCGCGCGCGCTCAGGGCGGAGCATCAGTTCACGCCCGGCACGAATTTGAAGGCGTGGCTGTTTCGCATCCTACGCAACACGTTCTTGAGCCAGTACCGGCGCCAGCGCCACAACCCGACGGTGGGCGGCCTCGACACCGTCGACGCGGACGCCCAGGGCGCGGCGACCGAGGCGTGGCTGCTCGGCGACATCGAGCTGGATCGCCTGCGCAAGGTGGTGGCCGAGGAGATCGAGGCAGCGCTGATGACGCTGTCGGAGGACGCGCGCGCGGTGATCCTGCTGGACCTGGAGGGCCTGACCGAGGTGGAGGTCGCCGACGTCGTCGGCTGCGCGGTGGGAACGGTGAAGTCGCGGCTCGCCCGCGCGCGGGCGGCGCTCCGGCAGAAGCTGAAGGACTATGCGCGGTGA
PROTEIN sequence
Length: 173
LSGIASEALAYVDALHNLARYLTGNETDAEDLVQETYARALRAEHQFTPGTNLKAWLFRILRNTFLSQYRRQRHNPTVGGLDTVDADAQGAATEAWLLGDIELDRLRKVVAEEIEAALMTLSEDARAVILLDLEGLTEVEVADVVGCAVGTVKSRLARARAALRQKLKDYAR*