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13_1_40cm_4_scaffold_18491

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_18491_1
unknown

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comp(3..68)
DNA (66bp) protein (22aa)

This feature has no annotations

13_1_40cm_4_scaffold_18491_2
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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234..752
DNA (519bp) protein (173aa)
RNA polymerase sigma factor n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GDD3_PROFC
RNA polymerase sigma24 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1661 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes.;"
13_1_40cm_4_scaffold_18491_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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760..1557
DNA (798bp) protein (266aa)
Transmembrane transcriptional regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S9Z1_9BURK
membrane protein
Membrane protein {ECO:0000313|EMBL:AHX12427.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
13_1_40cm_4_scaffold_18491_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1786..2232
DNA (447bp) protein (149aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SW63_JANMA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_4_scaffold_18491_5
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

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2294..3865
DNA (1572bp) protein (524aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Acidobacteria_64_8_curated
Oligopeptide ABC transporter substrate-binding protein id=4355654 bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
13_1_40cm_4_scaffold_18491_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3880..5631
DNA (1752bp) protein (584aa)
xaa-pro dipeptidyl-peptidase, peptidase family s15 (EC:3.4.14.11); K06978 Tax=GWA2_Rokubacteria_70_23_curated
Hydrolase CocE/NonD family protein id=4827668 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase S15
13_1_40cm_4_scaffold_18491_7
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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5665..5994
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG51_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
13_1_40cm_4_scaffold_18491_8
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

5999..7621
DNA (1623bp) protein (541aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Acidobacteria_64_8_curated
ABC transporter substrate-binding protein
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_18491_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7712..8632
DNA (921bp) protein (307aa)
Dipeptide transport system permease DppB id=4526369 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Glutathione ABC transporter permease {ECO:0000313|EMBL:ETX08378.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella s
appB; oligopeptide ABC transporter (permease)
13_1_40cm_4_scaffold_18491_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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8629..9507
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036B24DF
Peptide ABC transporter permease {ECO:0000313|EMBL:ETX08379.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. T
Oligopeptide transport system permease AppC
13_1_40cm_4_scaffold_18491_11
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9577..9855
DNA (279bp) protein (93aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24) Tax=RBG_13_Deltaproteobacteria_43_22_curated
sta:STHERM_c02790 oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein id=1242174 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_4_scaffold_18491_12
bacterium YEK0313, Bacteria

Not on your lists

9852..11585
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003753A70
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:CEJ10001.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_18491_13
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11544..11852)
DNA (309bp) protein (103aa)
Tax=RBG_16_Deltaproteobacteria_50_11_curated
13_1_40cm_4_scaffold_18491_14
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

12336..13370
DNA (1035bp) protein (345aa)
Xaa-Pro dipeptidyl-peptidase, peptidase family S15 (EC:3.4.14.11); K06978 Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Putative uncharacterized protein id=4412368 bin=GWC2_Syntrophus__56_31 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
peptidase S15
13_1_40cm_4_scaffold_18491_15
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13388..14173)
DNA (786bp) protein (262aa)
2-haloalkanoic acid dehalogenase, type II; K01560 2-haloacid dehalogenase [EC:3.8.1.2] Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
2-haloalkanoic acid dehalogenase, type II n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKQ4_AZOSU
2-haloalkanoic acid dehalogenase, type II
13_1_40cm_4_scaffold_18491_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14385..15257
DNA (873bp) protein (291aa)
Uncharacterized protein id=1863211 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium vaccae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cyclase SCIF3.09c Tax=GWA2_Rokubacteria_73_35_curated
cyclase
Displaying 16 items

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