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13_1_40cm_4_scaffold_2017_9

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(4395..5645)

Top 3 Functional Annotations

Value Algorithm Source
lysA; diaminopimelate decarboxylase (EC:4.1.1.20) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 416.0
  • Bit_score: 637
  • Evalue 1.60e-179
Diaminopimelate decarboxylase id=2164678 bin=GWA2_Methylomirabilis_73_35 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 387.0
  • Bit_score: 595
  • Evalue 3.70e-167
diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 415.0
  • Bit_score: 498
  • Evalue 2.30e-138

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1251
ATGGAACACATCGCGTACCGTCACGGCCAGCTCTCCTGTGAATCGGTCTCGCTCCGCGCGGTGGCCGAGGCCGTCGGCACGCCCGCCTACGTCTATTCCAAGGCTGCGCTGCTCGACGCCTTCGGCGCCTACGACCGCGCGTTCACGGACACGCCGCATCTGATCTGCTATTCGGTCAAGGCCAACTCGACCCTCGGCGTGCTGTCCACGCTGGCCAAGGCCGGCGCCGGCGCGGACATCGTGAGCGGCGGCGAGCTCTATCGCGCGCTGCGGGCGGGCATTCCGCCCAGGAAGATCATCTTCGACGGCGTCGGCAAGACCCGCGACGAGATGCGTGACGCGCTCAAGGCCGACATCCTGATGTTCAACGTCGAGTCGATGAGCGAGCTGCGCGCCCTGGACGAGGTGGCGCGCGAGGTGGGGACCCGGGCGCCGGTGGCGCTGCGGGTGAATCCCGACGTCGACCCCCAGACGCACCCCTACATCGCGACGGGGCTGAAGACCTCCAAGTTCGGGATCCCTATCGACCTGGCCCTCGACAGCTACGCCGAAGCGGCGCGCCTGCCCGGCCTCGAGGTCGTCGGGATCGACATGCACATCGGCTCCCAGCTCACCAAGACGTCGCCCTTCGCCGACGCGGCGGCGCGGCTGGGCGCGCTCGTCAAGATGCTCCGCGAGCGCGGGATCGTCATTCGCCTGCTCGACATCGGCGGCGGGCTGGGCATCCGGTACCGCGACGAGGCTCCGCCCAGCCCCCTGGACTACGCCCGCGCGGTGATCCCGCTCATCAAGGAGCTGGGGGTCACAATACTGATAGAGCCCGGACGGTCGATCGTCGGCAACGCGGGAGTCCTCCTCACCCGTGTGCTCTATCGGAAGGAGACGCCGGACAAGCGGTTCGTCGTCGTGGACGCGGCCATGAACGACCTCATCCGGCCGGCGCTCTACAACGCCTACCACGAGATCCGGCCGATCGATGAGCGGCGGCTCACGAGCCCGGTGGAGACGGCGGACGTGGTGGGACCGATCTGTGAGTCCGGCGACTTCCTGGCCAAGGACCGCCCGCTGCCCCGAGCGGAGGAGGGCGACCTGCTGGCGGTGATGAGCGCGGGGGCCTACACTTCGGTGATGGCATCGAACTACAACACGCGCCCGCGGGCGGCCGAGGTGCTCGTCGACGGCAATCGCTACACGATCGTGCGCCGCCGGGAGACGTACGAAGACCTGGTGGCGGGGGAGACGGTGTTATGA
PROTEIN sequence
Length: 417
MEHIAYRHGQLSCESVSLRAVAEAVGTPAYVYSKAALLDAFGAYDRAFTDTPHLICYSVKANSTLGVLSTLAKAGAGADIVSGGELYRALRAGIPPRKIIFDGVGKTRDEMRDALKADILMFNVESMSELRALDEVAREVGTRAPVALRVNPDVDPQTHPYIATGLKTSKFGIPIDLALDSYAEAARLPGLEVVGIDMHIGSQLTKTSPFADAAARLGALVKMLRERGIVIRLLDIGGGLGIRYRDEAPPSPLDYARAVIPLIKELGVTILIEPGRSIVGNAGVLLTRVLYRKETPDKRFVVVDAAMNDLIRPALYNAYHEIRPIDERRLTSPVETADVVGPICESGDFLAKDRPLPRAEEGDLLAVMSAGAYTSVMASNYNTRPRAAEVLVDGNRYTIVRRRETYEDLVAGETVL*