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13_1_40cm_4_scaffold_2017_14

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: 9865..10857

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 330.0
  • Bit_score: 536
  • Evalue 3.00e-149
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 326.0
  • Bit_score: 314
  • Evalue 3.70e-83
DNA-directed RNA polymerase subunit alpha id=4231232 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 329.0
  • Bit_score: 534
  • Evalue 6.20e-149

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGCTGGAGCTCGAGCTCCCCACGCGTCACGAGTGGCAGGTCTCCGAAAACCCCTACGGCAAGCTGGTCATCGAACCGTTCGAGCCGGGATTCGCGCTGACCGTCGGTAACGCCTACCGCCGCGTCGTCCTCTCCGCGATCCACGGCGCCGCGCCCACGTGGGTGAAGATCGAGAACGTCCTGCACGAGTTCTCCCACATGCCGGGCGTCATGGAGGACACGCTGGACATCCTCATGAACCTGCGCAAGGTGGTCTTCCGTCTTCACGTCAACCGCCCCAAGATCCTGCGGCTCAAGGTGCAGGGCGTCGGCGTCGTCAAGGCCGGCGACTTCGAGGCGGACGCCGACGTCGACATCCTGACGCCCGACGTGCCGCTGGCCACGCTGGACAAGGACGGCGTGCTGGAGATGGAGGTGTGCATCGAGCGCGGCCGCGGCTGGGTGCCGGCCGAGCGGCGGGAGCCGGAGGCGCTCCCGATCAACGCCATTCTCCTCGATGCCGACTTCTCCCCCGTCAAGCGGGTGAACGTCCACATGGAGCCGATGGGCCAGGCGCACGAGCGTCTCGTGATCGAGGTCTGGACGGACGGCAGCGTCACGCCGGCGCTGGCGGTGGGCGAGGCCTCCCGGATCCTGGAGGATCACTTCGATCTGCTGATGACTTTCCCGGTGGCGACTCCGGAGTCGGAGGAGGCGGAGCGGGACGAGCTGCGGCCGCGGGCCGAGCTGAACGAGAACCTCTTCCGCAACGTGGACGAGCTGGAGCTGTCGGTGCGGGCCTCCAACTGCCTCAAGACCGCCAACATCCGGACGATCGCCGACCTCGTGCAGAAGACCGAAGCCGAGCTGCTCAAGACGAAGAACTTCGGCAAGAAGTCGCTCAACGAGATCAAGACGATCCTCGGCGAGATGGGCCTCCACCTGGGGATGCGGCTGGATCCGGAGGAGCTGGAGCGCCTGCGCTCGCAGTACGAGCGCACCTTCGAAGGCTAA
PROTEIN sequence
Length: 331
MLELELPTRHEWQVSENPYGKLVIEPFEPGFALTVGNAYRRVVLSAIHGAAPTWVKIENVLHEFSHMPGVMEDTLDILMNLRKVVFRLHVNRPKILRLKVQGVGVVKAGDFEADADVDILTPDVPLATLDKDGVLEMEVCIERGRGWVPAERREPEALPINAILLDADFSPVKRVNVHMEPMGQAHERLVIEVWTDGSVTPALAVGEASRILEDHFDLLMTFPVATPESEEAERDELRPRAELNENLFRNVDELELSVRASNCLKTANIRTIADLVQKTEAELLKTKNFGKKSLNEIKTILGEMGLHLGMRLDPEELERLRSQYERTFEG*