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13_1_40cm_4_scaffold_2087_17

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: 12207..12935

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 216.0
  • Bit_score: 242
  • Evalue 3.60e-61
sigW5; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 216.0
  • Bit_score: 242
  • Evalue 5.00e-61
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 206.0
  • Bit_score: 138
  • Evalue 3.50e-30

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGAGCTGGATGGACTTCAACGAGTACGTCCTGATGGAAGGCGCCGTGAGGGATCGACTGGACGACCTCCATCGCACAACCCGGTCGAGGTGTTGGCGAGGTCGCGACAGGAAGGACGTGAAGATGGATCGGGATCCTCAGCTCGTGGAAGCTCTGCGGCTCCGCCAGCCGACCGCGGCGGAGCGTCTCGTCGCCACCTACGGCGACCGCGCCTATCGCCTGGCGACCGGCATTACCGGACACGCGCAGGACGCCGAGGAAGTCGTCCAGGACGCGTTCTGGACGGTGGTCCAGAAGATCGACACGTTCAGAGGGGACTCTGCCTTCGGCTCCTGGCTCTACCGCATCGTCGCGAACGCGGCCTATCAGAAACTCCGCGTCCAGCGGGCTCGGCGTCGGGACCTCTCGTTCGACGAGGTGGAGATGTCCCTCGATGAGCGCGGGCAGGACGACGAGCCCCGGGCCGACTGGGCCGCCCGAGCGGACGACCCGGCCCTCCAGGCTGAATTGCGGATGGTGCTGACGGCGGCGATCGACGATCTGCCCGTCGACTACCGCACCGCCGTGATCCTGCGCGATGTCGAGGGTTTGTCGAATCTGGAGATCGGCGAGGTTCTCGGGATCGGCGTCCCCAACGTGAAGTCTCGGGTCCACCGCGCGCGATTGTTTCTCCGCAAGCGGCTCGGACAGTACCTGGCCGAGCGGGTGCCTGCCGCGTGCGGCACCTGA
PROTEIN sequence
Length: 243
MSWMDFNEYVLMEGAVRDRLDDLHRTTRSRCWRGRDRKDVKMDRDPQLVEALRLRQPTAAERLVATYGDRAYRLATGITGHAQDAEEVVQDAFWTVVQKIDTFRGDSAFGSWLYRIVANAAYQKLRVQRARRRDLSFDEVEMSLDERGQDDEPRADWAARADDPALQAELRMVLTAAIDDLPVDYRTAVILRDVEGLSNLEIGEVLGIGVPNVKSRVHRARLFLRKRLGQYLAERVPAACGT*