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13_1_40cm_4_scaffold_2341_12

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: 9851..10378

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 172.0
  • Bit_score: 243
  • Evalue 2.10e-61
RNA polymerase, sigma-24 subunit, ECF subfamily id=4029898 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 170.0
  • Bit_score: 232
  • Evalue 2.70e-58
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 163.0
  • Bit_score: 121
  • Evalue 2.40e-25

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGGTCAACAACCCTTCGAGACGATCCTGGAGGCACACCACGCGGAGATCTATCGCTACCTCCTCCGGGTGACCGCGCGCGCTAGCGAGTCGGACGATCTCGCCCAGGAGACCTTCCTCCGCGCCTACAAGGCCTACCGGGCGCTGGCGCCGGACGCGAACGTGCGCGCCTGGCTGTTCACGATCGCGACCAACCTGGCTCGGAACCATTTCCGGGCCGAGCGGCGCCGGCGGAACGCCCACGCGGCCGTGCGGGCCACGCGGGCCGAGACGGACGGGACCGGCCCCGAGGGCGAGACCCTCTTCAAGGAGACGCGGGCGCATCTCGACCGCGCCGTCGCCCGCCTGCCCCTCAAGCAGCGGCTGGCCTTCGTGTTGAGAAAGGTTCATGACCTCGACTACGATGCGATTGCGCGAAACCTCGACTGCTCGGCGGAGAGCGCCCGGGCGCACGTCTTCCACGCGCTCAAGAAGATCCGCCAGGAGCTCCAGGCCTTCGCGCCGCCGCGGATGGAGCTCCAGCAATGA
PROTEIN sequence
Length: 176
MGQQPFETILEAHHAEIYRYLLRVTARASESDDLAQETFLRAYKAYRALAPDANVRAWLFTIATNLARNHFRAERRRRNAHAAVRATRAETDGTGPEGETLFKETRAHLDRAVARLPLKQRLAFVLRKVHDLDYDAIARNLDCSAESARAHVFHALKKIRQELQAFAPPRMELQQ*