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13_1_40cm_4_scaffold_2495_2

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(607..1521)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 306.0
  • Bit_score: 455
  • Evalue 6.20e-125
RNA polymerase sigma factor id=4853978 bin=GWA2_Methylomirabilis_73_35 species=Selenomonas noxia genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 308.0
  • Bit_score: 326
  • Evalue 4.00e-86
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 302.0
  • Bit_score: 275
  • Evalue 2.30e-71

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGAGTGACGACGAGGACGTGCTGCCCGACGAGCCCCTCGATGTCCTCGTCGACGCGTTGGACGAGGACGTCCGCGAAGAGACGCGGGAGACCAGCCGCGCCAACCTGGCCGTCTACCTGCGCGAGATCGGCCGCATCCCGTTGCTCTCGCGCGAGGAGGAGGTCGAGCTGGCGCGCCGCGCCCGGGCCGGTGACGCCGCCGCCAAGTCGCGCCTCATCGAGGCCAACCTGCGCCTCGTCGTCCAGGTCGCGCGGCGCTATCTCAATCGTGGGCTGCCCTTGCCCGACCTCATCGAGGAGGGCAACATCGGGCTGCTGCGGGCCGTCGATAAGTTCGATCCCGAGCGCGGCCTGCGCTTTTCCACCTATGCCACCTGGTGGATCCGACACGCCGTCATGCGGGCGCTGGCCAACCAGGCGCGGACGATCCGGCTACCGGTGCATGTCGAGATGCTGCTGGGACGGTACGCCAAGGAGCAGCAGCGGCTCACCCAGGCGCTGGGGCGCCTGCCGACGACGGCGGAGCTGGCCGCTGCCCTGGGGACGACCGAGGAGCAGGTGCGGGAGCTGGAGGAGGTCCGCCAGCCGCCCGTGTCGCTCGACGCGCCCATGTCGGGGCAGGGGCGGGTGGCGGACCTCGTCCCCGACACCTCCGCCGATCCCAACGCTGCGCTGACCGCGTTCTTCCTTGAGCGCGCCGACCTGGTGTCGGTGCTGGACGATCTGGCCGAGAACGAGCGCCGGGTGCTCCGCCGGCGCTTCGGGCTGGAGGGCAACGAGCCCGAGACGCTCGAGGCCATCGGGCGCCAGCTCGGTCTCACCCGCGAGCGCGTACGCCAGATCGAGGCGGCGGCCCTCCGCAAGCTCCGCGCGCTGCTGCGGGCCCGCGGCGTCGACCCGGCCGATTTCTTCTGA
PROTEIN sequence
Length: 305
MSDDEDVLPDEPLDVLVDALDEDVREETRETSRANLAVYLREIGRIPLLSREEEVELARRARAGDAAAKSRLIEANLRLVVQVARRYLNRGLPLPDLIEEGNIGLLRAVDKFDPERGLRFSTYATWWIRHAVMRALANQARTIRLPVHVEMLLGRYAKEQQRLTQALGRLPTTAELAAALGTTEEQVRELEEVRQPPVSLDAPMSGQGRVADLVPDTSADPNAALTAFFLERADLVSVLDDLAENERRVLRRRFGLEGNEPETLEAIGRQLGLTRERVRQIEAAALRKLRALLRARGVDPADFF*