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13_1_40cm_4_scaffold_2495_8

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(4701..4979)

Top 3 Functional Annotations

Value Algorithm Source
histone family protein DNA-binding protein; K04764 integration host factor subunit alpha Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 91.0
  • Bit_score: 175
  • Evalue 2.90e-41
Integration host factor, alpha subunit id=4853973 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 89.0
  • Bit_score: 171
  • Evalue 5.00e-40
integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 93.0
  • Bit_score: 104
  • Evalue 1.20e-20

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 279
GTGACCAAGAACGATCTCGTCAACGCCGTAGCGGCCCACGGGCTCTCGAAACGGCAGTCGGCCTCGGTGGTCGAGTCCGTCTTCGACATCATCTTTCGCTGTTTCGAGAAGGGCGAGGACGTGAAGATCGTCGGGTTCGGTCACTTCCGGATCCGGCACAAGGCATCGCGGCGCGGGCGCAATCCGCAGACGGGCGACAGCATCGAGATCACCGCCCGCAAGGTGCTGACGTTCAAGCCGAGCAAGGGGCTGAAGCAACGAATCAACAGTCATTCGTGA
PROTEIN sequence
Length: 93
VTKNDLVNAVAAHGLSKRQSASVVESVFDIIFRCFEKGEDVKIVGFGHFRIRHKASRRGRNPQTGDSIEITARKVLTFKPSKGLKQRINSHS*