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13_1_40cm_4_scaffold_262_5

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(3876..5258)

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 458.0
  • Bit_score: 700
  • Evalue 1.30e-198
Two component, sigma54 specific, transcriptional regulator, Fis family id=1767173 bin=GWA2_Methylomirabilis_73_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 452.0
  • Bit_score: 696
  • Evalue 1.30e-197
two component, sigma54 specific, transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 458.0
  • Bit_score: 394
  • Evalue 3.90e-107

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1383
GTGAAGCACGGGCGCACGGTCCTCGTCGTCGACGACGAGCCGACCGTCCTCGACGGCCTGCGGCTCACGCTGGAGGCCGACGGTTACGCCGTCCGCATCGCCGGCAGCGTCCAGACCGCGCTCTCCCTCGTGGCCCAGGCCGACCTCCAGGCCGCGATCGTCGACCTCATGCTCCCCGACGGCGACGGGATCGCGCTCACCCGGGAGCTGAAGAAGCGTGACCCGTCGGTCGAGGTGATCATCGTCACCGCCTACGGTTCGGTGCGGAAGGCCATGGAGGCCACCAAGGGCGCGGGGGCCTTCTACGTCCTCGAGAAGCCCTTCGACCCCGACGAGGTGCTGGGGCTCGTCAAGAACGCGCTCGAGCACCGCAAGCTGGTCGCCGAGAACAGCGACCTGCGGCGCCGGCTGGCCGAGCAGTCCGCCGACAGCGAGATTCTCTCCGCCGCCCCCTCCATGCGACGCGTGATGGAAACGGTGACGTCGGTGGCCGACGCCGACGCCAACGTCCTCATCGTCGGCGAGAGCGGCACCGGCAAGGAGCTGATCGCCAACGCACTGCACGAGAGGAGCCGACGCTGCGAGGGGCCCTGGATCAAGATCAACTGCGCCGCCCTGCCCAAGGAGCTCATCGAGTCGGAGCTGTTCGGACACACCAAGGGCTCGTTCACGGGCGCCACCGCCGAGAAGGTCGGCCTGCTCGAGGAGGCGCACCGGGGCTCGCTGCTGCTCGACGAGATCACCGAGATGCCCATCGATCTGCAGGCCAAGCTCCTCCGGGTGCTCGAGGAGCGGGTGGTACGGCGGATCGGGGGCACCAAGGCCGTGTCCGTCGATTTCCGCCTGATCTCCTCGACCAACCGGAACGCCGAGCTCGCCGTGAGGGAGGGCCAGCTCCGGCAGGACCTCTATTTCCGGATCAACACGGTGACCATCCAGGTGCCGCCGCTGCGCGAGCGCCCCGACGACGTCCCGCTGCTCGTGCGCGCCTTTCTCGAGCGCTACGCCGCCAAGCACGACCGCCGGGTGGACGGCATCGAGCCGGAGGCGTACCGGCGCCTGCTCGCCTACCCGTGGCCGGGGAACGTGAGGGAGCTGCAGAACGCGATCGAGCACGCCGTCCTGGTGATGCGCGGCAAGCAGATCACGCTCGCCGATCTCCCCGAGGCGCTCCAGCGCACGGTCGCGGAGGGCGGGGCGGCCTCGATCGCGCCCTCGGAGGTGCCCGCGGGCTCACTGGAGGAGATCGAGCGGGCCTCGATCCTCAAGGCGCTCGAGACGACCCGGTGGAACAAGCAGGCCGCGGCCGCGCTCCTGGGCCTGCGCCGCCCCACCCTCTACTCCAAGATGCGCAAGCACGGCATTCCCCAGCGGCCCAGCTGA
PROTEIN sequence
Length: 461
VKHGRTVLVVDDEPTVLDGLRLTLEADGYAVRIAGSVQTALSLVAQADLQAAIVDLMLPDGDGIALTRELKKRDPSVEVIIVTAYGSVRKAMEATKGAGAFYVLEKPFDPDEVLGLVKNALEHRKLVAENSDLRRRLAEQSADSEILSAAPSMRRVMETVTSVADADANVLIVGESGTGKELIANALHERSRRCEGPWIKINCAALPKELIESELFGHTKGSFTGATAEKVGLLEEAHRGSLLLDEITEMPIDLQAKLLRVLEERVVRRIGGTKAVSVDFRLISSTNRNAELAVREGQLRQDLYFRINTVTIQVPPLRERPDDVPLLVRAFLERYAAKHDRRVDGIEPEAYRRLLAYPWPGNVRELQNAIEHAVLVMRGKQITLADLPEALQRTVAEGGAASIAPSEVPAGSLEEIERASILKALETTRWNKQAAAALLGLRRPTLYSKMRKHGIPQRPS*