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13_1_40cm_4_scaffold_3809_11

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(13470..14816)

Top 3 Functional Annotations

Value Algorithm Source
lptD; lipopolysaccharide biogenesis outer membrane protein LptD; K04744 LPS-assembly protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 423.0
  • Bit_score: 512
  • Evalue 6.30e-142
organic solvent tolerance protein; K04744 LPS-assembly protein id=14627077 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 413.0
  • Bit_score: 492
  • Evalue 3.70e-136
organic solvent tolerance protein similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 430.0
  • Bit_score: 224
  • Evalue 6.90e-56

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1347
GTGAGGACTCTTGATTCCGCCCTTCTCTTTCTGAGCGGTCTGCTGGTGGCCGCAGCGTTCATCGACGCTCGGCCCGCCGTGGCGCAACGCCCGACGTCGGCGACGGTGCCCACGGCTGGGGGTGACGTCACGGTTCTGGCCGACCGCCTCGAAGAGGTCGGGCCCGACAACCTTCTCGTCGCCATCGGCAACGTCGAGATCTCGCGCGGCAGCCAACGCCTGACCGCGGATCGCGTCGAGATCAATCGCCTCACGGGCGACACGGTCGCGGAAGGAAGGGCGATCTTCTACGATGGCGATGACCAGTTGATGGGCGACCGCATCGAGTACAACTTCAAGACGGGCACCGGTGTCGTCTATCACGGCGCCGCGCGGACGGCGCCTTACTATCAGGTCGGCGGGGAGCGGATGGAGCGGCTGGGCGAGGGCCGGTACCGGATCCGGCGGGGAGTCTTCACGACCTGCGAGGACGACCCTCCCACCTGGTCGTTCCGGTTCGGCTCGGCCGACGCCGACCTCGAAGAGCAGGTCTACGGGACGAACGCCTCGTTCTGGGTGAAGCGCGTTCCGCTGATTCCCTTCTTTCCCTTCTTCGCCGCCGCCCTGCGCCGTGAGCGCCAGACCGGCTTCCTCTTCCCCCGCTTCGGCAGCTCGACACGGAAGGGCAACTTCGTCGAGCTCCCCTTCTTCTGGGCGATCTCCGACAGTCAGGACGCCGCCATCACGCTCGATCTCTACGAAGCGCGGGGCCCCGGCGCGACCCTCGAGTACCGCTACATTCTGTCCGAGGTCCACCGCGGCGACGTCAGTGGCTTCTACCTGAAGGAGACCGAGCGCAGGCAGGTGGCGGGGCAGGGGCACGACGACAACCGCGGCTGGTGGCACGCCAAGGACGATTGGAACCTCGGCCACGGGCTCTCCTTCCGAGCGGATGTCAACGGCGTGACCGACGACCTGGTGTTCCGGGAGTACGCGGTCCGGCTTCAGGAAAGGAGCGCCCAGCGGGTCGACTCCAACGTGTTCCTCACGTGGGGCCGGCCCACGTTCAACGTGGTGGGCAGCCTGTCCTGGTATCAGGACCTGACCCAGCGTCGGCCGGTGGAGCTGCAGCGCCTGCCGGACATCCGGCTGGAGAGTGTCCGCCAACCGCTGCCGGGGTTGCCCAGCGTCCTCGGCGAGGTGGAGTCGAGCGCCACGCACTTCGTCCGTGACATCGGCGCCGAGGGCAACCGGGTCGACCTCCACCCCCGCCTCACGCGGCCCACCCCCGTGGCCGCGCCGGCGGGCGCCTCACGGCGTACGACAGGACCGTCACCGGGACGCGGCTCACCGGCGACGGGGGGCTGA
PROTEIN sequence
Length: 449
VRTLDSALLFLSGLLVAAAFIDARPAVAQRPTSATVPTAGGDVTVLADRLEEVGPDNLLVAIGNVEISRGSQRLTADRVEINRLTGDTVAEGRAIFYDGDDQLMGDRIEYNFKTGTGVVYHGAARTAPYYQVGGERMERLGEGRYRIRRGVFTTCEDDPPTWSFRFGSADADLEEQVYGTNASFWVKRVPLIPFFPFFAAALRRERQTGFLFPRFGSSTRKGNFVELPFFWAISDSQDAAITLDLYEARGPGATLEYRYILSEVHRGDVSGFYLKETERRQVAGQGHDDNRGWWHAKDDWNLGHGLSFRADVNGVTDDLVFREYAVRLQERSAQRVDSNVFLTWGRPTFNVVGSLSWYQDLTQRRPVELQRLPDIRLESVRQPLPGLPSVLGEVESSATHFVRDIGAEGNRVDLHPRLTRPTPVAAPAGASRRTTGPSPGRGSPATGG*