ggKbase home page

13_1_40cm_4_scaffold_5969_6

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(5243..6913)

Top 3 Functional Annotations

Value Algorithm Source
metallo-beta-lactamase superfamily hydrolase; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 552.0
  • Bit_score: 875
  • Evalue 3.50e-251
Ribonuclease J 1 (RNase J1) id=2399877 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 552.0
  • Bit_score: 861
  • Evalue 6.30e-247
hydrolase similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 555.0
  • Bit_score: 594
  • Evalue 2.40e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1671
GTGAAGCTTCTGACCGAGCCGGCCGTCCGGCTGATCCCCCTCGGTGGCCTCGGCGAGATCGGCCTCAACATGATGCTCGTCGAGTTCGGCGACGATCTCATCGCCGTCGACTGTGGCCTCATGTTCCCCGACCCCGACGAGCTGCCCGGCATCGACTACGTGATCCCGGACTTCTCCTACGCGCTGGCCAAGCGCGAGAACTTCCGCGCCGTCTTCCTCACCCACGGCCACGAGGATCACATCGGGGCGCTGCCGTACCTCCTGCGGGAGGCGCGGGTGCCCGTGTACGGGACACCGATGACGCTCGGGCTGGTGGCCGAGCGTCTGCGCGAGCACGACCTCCTGGAGGGAGCCGAGCTGCGCGCGATGCGGCCCCGCGACCGGATCGAGGCTGGACCGTTCCGCGTCGAGCCGATCCGCGTCACCCACTCCATCGTCGACGGGATCGGGCTAGCCATCGACACGCCCGTGGGCACCCTGGTCCACACCGGCGACTTCAAGCTCGACCCGAGCCCCCTCGACGGCGAGCCGCCCGACTATCTGAAGTTCGCCGAGCTGGGCGAGCAGGGCGTCCTCGTGCTCTGCTCGGACTCCACCAACGTGGATCGACCCGGCCACACGCGCTCGGAGATGGAGGTCGGCGCGGCGCTCCGGGAACGCTTCGCGCGGGCCACGGGGCGGATCATCCTGGCCACGTTCGCCTCCCACATCCATCGCATCCAGCAGGTGCTCACCCTGGCCGCCGAGCACGGCCGCCGGGTGGCGCTGGTGGGCATGAGCATGCAGAGGAACGTGGCGCTGGCCGCCGAGCTCGGCTATCTGCGGATTCCCTCCCAGGTGCTGCTGCCGCTGGAAGAGCTGGCCCTGCTGCCGCTCGAGCGGCAGGTGATCCTGTCGACGGGCAGCCAGGGCGAGCCGAACTCGGCCCTGGCCCTGATGGCGGCCGGCGAGCACAGGGCGGTGCAGATCGAGCGCGGCGACCTCGTTATCGTCTCCGCGCGCGTGATCCCCGGCCACGAGCGAACGGTGGGCCGCGTGATCAACGCGCTGCTGCGCCTGGGCGCCGAGGTGCTCTACGAGGACAACGCGTTCGTGCACGTGTCGGGGCACGCGAGCCAGGAAGACCTGAAGCTCATGCTGACGCTGACGCGCCCGCGGTACTTCATCCCCGTGCACGGCGAGTACCGGCACCTCCTGGGCCACGCGCGCTTGGCGGCCAGCGTGGGGCTCACGCCCGACCGCATCTTCCTCCTCGAGGACGGCCTGGGCCTGGAGGTGACGAAGACGGCGGCCCGGGTGGTGGGCCGCTACCCAGTCGGGCGCGTGCTCGTGGACGGCAAGGGCATCGGCGACATCGGGGCGGTGGTGCTGCGGGATCGCCAGCTCCTGGCCCAGGACGGGCTGGTGGCGGTCTCGCTCGTGGTGAACCGCGAGGGCAAGGTCGTGGCCGGGCCGGAGATCGCCACGCGCGGCTTCGTCCACGTCAAGGAGAACGAGCCGCTGCTGGAGGAGCTGCGCGCGTCCATTCGGGCCGCGCTGGCGGCGCGGATTGCGACGACGCCCGTCGACCGCGAGGCGATCGGAGCGCTGGTGCGCACGACGGTCCGCCACTTCATCAACCAGCGCTTCCAGCGCAAGCCGGTGGTCCTGCCGGTCGTCCTGGAGGTGTGA
PROTEIN sequence
Length: 557
VKLLTEPAVRLIPLGGLGEIGLNMMLVEFGDDLIAVDCGLMFPDPDELPGIDYVIPDFSYALAKRENFRAVFLTHGHEDHIGALPYLLREARVPVYGTPMTLGLVAERLREHDLLEGAELRAMRPRDRIEAGPFRVEPIRVTHSIVDGIGLAIDTPVGTLVHTGDFKLDPSPLDGEPPDYLKFAELGEQGVLVLCSDSTNVDRPGHTRSEMEVGAALRERFARATGRIILATFASHIHRIQQVLTLAAEHGRRVALVGMSMQRNVALAAELGYLRIPSQVLLPLEELALLPLERQVILSTGSQGEPNSALALMAAGEHRAVQIERGDLVIVSARVIPGHERTVGRVINALLRLGAEVLYEDNAFVHVSGHASQEDLKLMLTLTRPRYFIPVHGEYRHLLGHARLAASVGLTPDRIFLLEDGLGLEVTKTAARVVGRYPVGRVLVDGKGIGDIGAVVLRDRQLLAQDGLVAVSLVVNREGKVVAGPEIATRGFVHVKENEPLLEELRASIRAALAARIATTPVDREAIGALVRTTVRHFINQRFQRKPVVLPVVLEV*