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13_1_40cm_4_scaffold_5969

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5969_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..287)
DNA (285bp) protein (95aa)
oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Oligopeptide ABC transporter, permease protein id=2476250 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter, permease protein
13_1_40cm_4_scaffold_5969_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(284..1030)
DNA (747bp) protein (249aa)
oligopeptide ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Oligopeptide ABC transporter, permease protein id=2476252 bin=GWA2_Methylomirabilis_73_35 species=Ruegeria pomeroyi genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter, permease protein
13_1_40cm_4_scaffold_5969_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1258..1935)
DNA (678bp) protein (226aa)
oligopeptide ABC transporter periplasmic oligopeptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein id=2476385 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
13_1_40cm_4_scaffold_5969_4
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2244..2621
DNA (378bp) protein (126aa)
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
13_1_40cm_4_scaffold_5969_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3099..5243)
DNA (2145bp) protein (715aa)
cell division protein FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cell division protein id=4104868 bin=GWF2_Methylomirabilis_70_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA translocase FtsK
13_1_40cm_4_scaffold_5969_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5243..6913)
DNA (1671bp) protein (557aa)
metallo-beta-lactamase superfamily hydrolase; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribonuclease J 1 (RNase J1) id=2399877 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hydrolase
13_1_40cm_4_scaffold_5969_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7097..8299)
DNA (1203bp) protein (401aa)
putative peptidase M23 family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M23B id=2399879 bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_5969_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(8244..9071)
DNA (828bp) protein (276aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribosomal RNA small subunit methyltransferase A id=2399881 bin=GWA2_Methylomirabilis_73_35 species=Frateuria aurantia genus=Frateuria taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dimethyladenosine transferase
13_1_40cm_4_scaffold_5969_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9068..9694)
DNA (627bp) protein (209aa)
dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=GWA2_Rokubacteria_73_35_curated
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase id=2399883 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5969_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9691..11832)
DNA (2142bp) protein (714aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA polymerase id=2399886 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA polymerase I
Displaying 10 items

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