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13_1_20cm_full_scaffold_1029

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1029_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2..1561
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF0_GEMAT
Type II and III secretion system protein {ECO:0000313|EMBL:AHG91513.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_full_scaffold_1029_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1576..4077
DNA (2502bp) protein (834aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_1029_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4160..5344
DNA (1185bp) protein (395aa)
aroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE8_GEMAT
13_1_20cm_full_scaffold_1029_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5341..5862
DNA (522bp) protein (174aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Shikimate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE7_GEMAT
Shikimate kinase
13_1_20cm_full_scaffold_1029_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5901..8294
DNA (2394bp) protein (798aa)
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA topoisomerase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE5_GEMAT
DNA topoisomerase I
13_1_20cm_full_scaffold_1029_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8303..9625
DNA (1323bp) protein (441aa)
gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme Gid; K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_c
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE4_GEMAT
gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme Gid
13_1_20cm_full_scaffold_1029_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9622..10533
DNA (912bp) protein (304aa)
Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE3_GEMAT
xerC; tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tyrosine recombinase xerC
13_1_20cm_full_scaffold_1029_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10550..11083
DNA (534bp) protein (178aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=861299 specie
ATP-dependent protease subunit HslV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=HSLV_GEMAT
ATP-dependent protease hslV
13_1_20cm_full_scaffold_1029_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11083..12606
DNA (1524bp) protein (508aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD9_GEMAT
ATP-dependent hsl protease ATP-binding subunit hslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent hsl protease ATP-binding subunit hslU
13_1_20cm_full_scaffold_1029_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12624..13526
DNA (903bp) protein (301aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ornithine carbamoyltransferase, catabolic n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD7_GEMAT
Ornithine carbamoyltransferase
13_1_20cm_full_scaffold_1029_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13526..14632
DNA (1107bp) protein (369aa)
gcvT; aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gcvT; aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD5_GEMAT rbh
13_1_20cm_full_scaffold_1029_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14652..15152
DNA (501bp) protein (167aa)
Molybdopterin adenylyltransferase n=1 Tax=Desulfomonile tiedjei DSM 6799 RepID=I4C9J9_9DELT alias=RBG9_12_86,RBG9_C00012G00086 id=1244890 tax=RBG9 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria
moaB; Molybdopterin adenylyltransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
molybdenum cofactor synthesis domain protein
13_1_20cm_full_scaffold_1029_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15166..16689
DNA (1524bp) protein (508aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD4_GEMAT rbh
putative NtrC family two-component response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
sigma-54 factor interaction domain-containing protein
13_1_20cm_full_scaffold_1029_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16811..18058
DNA (1248bp) protein (416aa)
Fe-S cluster domain protein n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GFC5_SPITZ
PAS domain S-box Tax=RBG_16_Gemmatimonadetes_66_8_curated
Fe-S cluster domain-containing protein
Displaying 14 items

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