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13_1_20cm_full_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_106_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3..848
DNA (846bp) protein (282aa)
trpA; tryptophan synthase alpha chain (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
trpA; tryptophan synthase alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A952_GEMAT
13_1_20cm_full_scaffold_106_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

845..2923
DNA (2079bp) protein (693aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C4P2_9BACT
methyl-accepting chemotaxis sensory transducer Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_1_20cm_full_scaffold_106_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2983..3369
DNA (387bp) protein (129aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatim
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4X5_OCEP5
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_1_20cm_full_scaffold_106_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3362..4012
DNA (651bp) protein (217aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=GWC2_Gemmatimonadetes_71_10_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LLM0_THEPS
13_1_20cm_full_scaffold_106_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4000..4146
DNA (147bp) protein (49aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=GWC2_Gemmatimonadetes_71_10_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KP81_9FIRM
3-methyl-2-oxobutanoate hydroxymethyltransferase
13_1_20cm_full_scaffold_106_6

Not on your lists

4143..5408
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TR78_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKM82931.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_full_scaffold_106_7
unknown

Not on your lists

5420..7102
DNA (1683bp) protein (561aa)

This feature has no annotations

13_1_20cm_full_scaffold_106_8
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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7356..8228
DNA (873bp) protein (291aa)
pantoate/beta-alanine ligase; K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] Tax=GWC2_Nitrospirae_56_14_curated
Pantothenate synthetase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QCX8_9FIRM
panC; pantoate--beta-alanine ligase
13_1_20cm_full_scaffold_106_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8334..8831
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A951_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_full_scaffold_106_10
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

8840..9211
DNA (372bp) protein (124aa)
hypothetical protein Tax=GWC2_Elusimicrobia_65_9_curated
13_1_20cm_full_scaffold_106_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9149..10213)
DNA (1065bp) protein (355aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RLMN_GEMAT
hypothetical protein
13_1_20cm_full_scaffold_106_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10210..11106)
DNA (897bp) protein (299aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_full_scaffold_106_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11251..11616
DNA (366bp) protein (122aa)
ptsN; phosphotransferase system enzyme IIA, regulates nitrogen metabolism; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PTS system, IIA component n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4A8_SALRD
PTS system transporter subunit IIA
13_1_20cm_full_scaffold_106_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11622..13391
DNA (1770bp) protein (590aa)
Aspartate--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A947_GEMAT rbh
Aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHG90893.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_106_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13388..14344
DNA (957bp) protein (319aa)
PhoH-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A946_GEMAT
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:AHG90892.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_106_16
unknown

Not on your lists

comp(14423..14584)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_20cm_full_scaffold_106_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14674..16479
DNA (1806bp) protein (602aa)
7TM receptor with intracellular metal dependent phosphohydrolase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI10_RHOM4
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AHG90891.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_106_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16433..16897
DNA (465bp) protein (155aa)
Endoribonuclease YbeY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A945_GEMAT
hypothetical protein; K07042 probable rRNA maturation factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_106_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16897..18072
DNA (1176bp) protein (392aa)
Transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A944_GEMAT
transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transporter-associated region
13_1_20cm_full_scaffold_106_20
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

18069..19268
DNA (1200bp) protein (400aa)
CBS domain containing protein n=1 Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4XAD3_SALTO
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
CBS domain-containing protein
13_1_20cm_full_scaffold_106_21
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19265..20611
DNA (1347bp) protein (449aa)
magnesium transporter n=1 Tax=Pedobacter agri RepID=UPI000299E7E1 rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter
magnesium transporter
13_1_20cm_full_scaffold_106_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21032..21631
DNA (600bp) protein (200aa)
putative transport system kinase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative transport system kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A942_GEMAT
putative transport system kinase
13_1_20cm_full_scaffold_106_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21628..23193
DNA (1566bp) protein (522aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methylmalonyl-CoA mutase n=1 Tax=Desulfurispora thermophila RepID=UPI0003649C1D
methylmalonyl-CoA mutase, large subunit
13_1_20cm_full_scaffold_106_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23197..24309
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUE0_9AQUI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptide chain release factor 1
13_1_20cm_full_scaffold_106_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24309..24725
DNA (417bp) protein (139aa)
Putative isobutyryl-CoA mutase small subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A940_GEMAT
Methylmalonyl-CoA mutase domain-containing protein
Methylmalonyl-CoA mutase domain-containing protein {ECO:0000313|EMBL:AHG90884.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_106_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24765..26333
DNA (1569bp) protein (523aa)
putative acyl-CoA carboxylase beta subunit (EC:6.4.1.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative acyl-CoA carboxylase beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A939_GEMAT
carboxyl transferase
13_1_20cm_full_scaffold_106_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26330..29128
DNA (2799bp) protein (933aa)
peptidase S8/S53 subtilisin kexin sedolisin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ial:IALB_3165 Subtilisin-like serine protease alias=RAAC39_AAC7_scaffold_131_132,RAAC39_C00005G00132 id=718195 tax=RAAC39 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria rbh
subtilisin-like serine protease
13_1_20cm_full_scaffold_106_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

29125..30519
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A938_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF1446
13_1_20cm_full_scaffold_106_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

30516..30866
DNA (351bp) protein (117aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SQ10_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90881.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_106_30
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

30863..31627
DNA (765bp) protein (255aa)
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:CDM64423.1}; EC=4.2.1.18 {ECO:0000313|EMBL:CDM64423.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomon
enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SQ09_9BACT
Displaying items 1-30 of 32 in total

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