ggKbase home page

13_1_20cm_full_scaffold_1358

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1358_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..493)
DNA (492bp) protein (164aa)
glucose inhibited division protein; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=GWA2_Rokubacteria_73_35_curated
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=RSMG_DESRM
methyltransferase GidB
13_1_20cm_full_scaffold_1358_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(524..2209)
DNA (1686bp) protein (562aa)
Membrane protein insertase YidC n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=YIDC_SYNAS
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_full_scaffold_1358_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2436..2690)
DNA (255bp) protein (85aa)
putative ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
hypothetical protein n=1 Tax=Brachybacterium muris RepID=UPI00034D0DB6
Ribonuclease P protein component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_full_scaffold_1358_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3164..4483
DNA (1320bp) protein (440aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHJ6_9BACT
dnaA; chromosomal replication initiator protein dnaA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dnaA; chromosomal replication initiator protein dnaA
13_1_20cm_full_scaffold_1358_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4647..5741
DNA (1095bp) protein (365aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLW3_9BACT
13_1_20cm_full_scaffold_1358_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5779..6852
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI000377309B
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
recF protein
13_1_20cm_full_scaffold_1358_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

6849..9200
DNA (2352bp) protein (784aa)
DNA gyrase B subunit (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
DNA gyrase B subunit (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E8P0_GEOLS
13_1_20cm_full_scaffold_1358_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


9303..11741
DNA (2439bp) protein (813aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLW1_9BACT rbh
13_1_20cm_full_scaffold_1358_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11746..13041
DNA (1296bp) protein (432aa)
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
seryl-tRNA synthase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B739FE
seryl-tRNA synthetase
13_1_20cm_full_scaffold_1358_10
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13107..14228
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRH4_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS62507.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
13_1_20cm_full_scaffold_1358_11
unknown

Not on your lists

14815..15018
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_full_scaffold_1358_12
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(14929..16692)
DNA (1764bp) protein (588aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI000370ACAE
laminin G, domain-containing 2 Tax=RBG_13_Chloroflexi_68_17_curated
hypothetical protein
13_1_20cm_full_scaffold_1358_trna_1
unknown

Not on your lists

16981..17066
DNA (86bp)
transferRNA
13_1_20cm_full_scaffold_1358_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(17071..17454)
DNA (384bp) protein (128aa)
acetoacetate metabolism regulatory protein AtoC n=1 Tax=Citrobacter freundii RepID=UPI0003126BDC
dctD; response regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
transcriptional regulator
13_1_20cm_full_scaffold_1358_14
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17711..18658
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJX9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETW95583.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
13_1_20cm_full_scaffold_1358_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18669..19112)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036D07CA
metallo-dependent hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
metal-dependent hydrolase
Displaying 16 items

View Taxonomy