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13_1_20cm_full_scaffold_1388

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1388_1
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

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comp(2..268)
DNA (267bp) protein (89aa)
50S ribosomal protein L22 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=RL22_CHLAD
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_45_13_curated
rplV; 50S ribosomal protein L22
13_1_20cm_full_scaffold_1388_2
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(271..555)
DNA (285bp) protein (95aa)
30S ribosomal protein S19 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZL6_THEOJ
30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermose
13_1_20cm_full_scaffold_1388_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(559..1404)
DNA (846bp) protein (282aa)
50S ribosomal protein L2 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THE1_9CHLR
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter
50S ribosomal protein L2
13_1_20cm_full_scaffold_1388_4
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists


comp(1404..1694)
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=6 Tax=Thermus RepID=RL23_THET2
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=762633 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain SG0
13_1_20cm_full_scaffold_1388_5
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1691..2311)
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=2 Tax=Thermoanaerobacter RepID=D3T4R6_THEIA
50S ribosomal protein L4 Tax=S_Thermoanaerobacterales_50_218
50S ribosomal protein L4/L1e
13_1_20cm_full_scaffold_1388_6
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2330..2977)
DNA (648bp) protein (216aa)
50S ribosomal protein L3 n=1 Tax=Succinispira mobilis RepID=UPI000364563A
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environm
50S ribosomal protein L3
13_1_20cm_full_scaffold_1388_7
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2979..3284)
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KE50_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
ribosomal protein S10, bacterial/organelle
13_1_20cm_full_scaffold_1388_8
GWC1_OP11_46_15, Microgenomates, Bacteria

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comp(3288..3905)
DNA (618bp) protein (206aa)
tuf; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu, partial n=3 Tax=Desulfurispora thermophila RepID=UPI00036D8FF5
Elongation factor Tu {ECO:0000313|EMBL:KKU24553.1}; TaxID=1618526 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_46_15.;"
13_1_20cm_full_scaffold_1388_9
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4447..6231)
DNA (1785bp) protein (595aa)
Elongation factor G n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=EFG_MOOTA
fusA; elongation factor G
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacter
13_1_20cm_full_scaffold_1388_10
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

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comp(6493..6963)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2K1_SPHTD
30S ribosomal protein S7
rpsG; 30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
13_1_20cm_full_scaffold_1388_11
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(6965..7348)
DNA (384bp) protein (128aa)
30S ribosomal protein S12 n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=RS12_SYNJA
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" so
rpsL; 30S ribosomal protein S12
13_1_20cm_full_scaffold_1388_12
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

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comp(7468..7938)
DNA (471bp) protein (157aa)
seg 9..22 Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
seg 9..22 alias=RBG9_7_80,RBG9_C00007G00080 id=1244620 tax=RBG9
13_1_20cm_full_scaffold_1388_13
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(7951..9267)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0M9_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98816.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
13_1_20cm_full_scaffold_1388_14
GWA2_OP11_47_9, Gottesmanbacteria, Microgenomates, Bacteria

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comp(9264..10589)
DNA (1326bp) protein (442aa)
Uncharacterized protein Tax=GWA2_OP11_47_9
transmembrane_regions 168..185 alias=ACD37_C00148G00013,ACD37_18462.18808.8G0013,ACD37_18462.18808.8_13 id=41914 tax=ACD37 species=OP11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OP11 organism_group=OP11 organism_desc=OP11
13_1_20cm_full_scaffold_1388_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

10636..12744
DNA (2109bp) protein (703aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TIK0_9CHLR
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:EFH89257.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedon
peptidase S9 prolyl oligopeptidase active site domain-containing protein
13_1_20cm_full_scaffold_1388_16
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(12802..14514)
DNA (1713bp) protein (571aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=RPOC_CHLAD
DNA-directed RNA polymerase subunit beta'
Displaying 16 items

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