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13_1_20cm_full_scaffold_1562

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1562_1
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

Not on your lists


comp(46..519)
DNA (474bp) protein (158aa)
50S ribosomal protein L13 n=1 Tax=Clostridium sp. CAG:813 RepID=R7MH24_9CLOT
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
50S ribosomal protein L13
13_1_20cm_full_scaffold_1562_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(522..1247)
DNA (726bp) protein (242aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZP5_THEOJ
13_1_20cm_full_scaffold_1562_3
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


comp(1244..1543)
DNA (300bp) protein (100aa)
50S ribosomal protein L17 n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YSD7_MELRP
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Mel
13_1_20cm_full_scaffold_1562_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(1608..2564)
DNA (957bp) protein (319aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THB7_9CHLR
DNA-directed RNA polymerase subunit alpha
13_1_20cm_full_scaffold_1562_5
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2586..2963)
DNA (378bp) protein (126aa)
30S ribosomal protein S4 n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M769_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
30S ribosomal protein S4
13_1_20cm_full_scaffold_1562_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists


comp(3169..3561)
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THB9_9CHLR
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter
30S ribosomal protein S11
13_1_20cm_full_scaffold_1562_7
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists


comp(3565..3948)
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=RS13_PELTS
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=CSP1_4_Chloroflexi
rpsM; 30S ribosomal protein S13
13_1_20cm_full_scaffold_1562_8
Desulfurella acetivorans, Desulfurella, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3957..4070)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZW7_9BACT
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=694431 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Desu
13_1_20cm_full_scaffold_1562_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(4361..5179)
DNA (819bp) protein (273aa)
map; methionine aminopeptidase (EC:3.4.11.18) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Methionine aminopeptidase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS68_KYRT2
methionine aminopeptidase
13_1_20cm_full_scaffold_1562_10
Jeotgalibacillus alimentarius, Jeotgalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5176..5844)
DNA (669bp) protein (223aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0U5_METPS
13_1_20cm_full_scaffold_1562_11
GWA1_OP11_47_8_very_partial, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(5870..7174)
DNA (1305bp) protein (435aa)
Protein translocase subunit SecY {ECO:0000313|EMBL:KKU80814.1}; TaxID=1618438 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA1_47_8.;"
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY alias=gwa2_scaffold_993_57 id=5085232 tax=GWA2_OP11 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project
preprotein translocase, SecY subunit
13_1_20cm_full_scaffold_1562_12
Anoxybacillus flavithermus, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(7178..7921)
DNA (744bp) protein (248aa)
50S ribosomal protein L15 n=1 Tax=Anoxybacillus flavithermus AK1 RepID=M8CVZ5_9BACI
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1297581 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anox
13_1_20cm_full_scaffold_1562_13
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists


comp(7918..8100)
DNA (183bp) protein (61aa)
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 alias=RBG9_63_101,RBG9_C00063G00101 id=1247434 tax=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
LSU ribosomal protein L30P
13_1_20cm_full_scaffold_1562_14
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8103..8684)
DNA (582bp) protein (194aa)
30S ribosomal protein S5 n=1 Tax=Desulfurispora thermophila RepID=UPI000371F862
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropioni
13_1_20cm_full_scaffold_1562_15
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists


comp(8695..9063)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CUR9_9BACT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM
50S ribosomal protein L18
13_1_20cm_full_scaffold_1562_16
Bacillus coagulans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(9063..9620)
DNA (558bp) protein (186aa)
50S ribosomal protein L6 n=1 Tax=Bacillus acidiproducens RepID=UPI00035E501F
rplF; ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1121088 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus c
13_1_20cm_full_scaffold_1562_17
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(9624..10019)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UWC8_EEGSY
RpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (str
Displaying 17 items

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