ggKbase home page

13_1_20cm_full_scaffold_2334

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_2334_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1..2538
DNA (2538bp) protein (846aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=uncultured bacterium W5-102b RepID=H9BWL6_9BACT
13_1_20cm_full_scaffold_2334_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2548..3096
DNA (549bp) protein (183aa)
methionine sulfoxide reductase A; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=RBG_16_Gemmatimonadetes_66_8_curated
methionine sulfoxide reductase A n=1 Tax=Meiothermus timidus RepID=UPI000371683C
methionine-S-sulfoxide reductase
13_1_20cm_full_scaffold_2334_3
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

3093..3599
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q310G8_DESDG
hypothetical protein Tax=GWF2_Lentisphaerae_45_14_curated
hypothetical protein
13_1_20cm_full_scaffold_2334_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3596..4033
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I408_CALAS
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_full_scaffold_2334_5
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4030..4833)
DNA (804bp) protein (268aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V5I4_9PSEU
alpha/beta hydrolase fold protein Tax=CG_Delta_03
putative hydrolase or acyltransferase of alpha/beta superfamily
13_1_20cm_full_scaffold_2334_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(4884..9053)
DNA (4170bp) protein (1390aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
DEAD/H box helicase domain protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IVL6_PSEUL
DEAD/DEAH box helicase
13_1_20cm_full_scaffold_2334_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9140..10435)
DNA (1296bp) protein (432aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR7_9BACT
hydroxymethylbutenyl pyrophosphate reductase
Hydroxymethylbutenyl pyrophosphate reductase {ECO:0000313|EMBL:AHG91965.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_2334_8
unknown

Not on your lists

comp(10490..10927)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_20cm_full_scaffold_2334_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10999..11481)
DNA (483bp) protein (161aa)
hypothetical protein; K12073 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative Pol-Pal system-associated acyl-CoA thioesterase n=1 Tax=mine drainage metagenome RepID=E6PEA1_9ZZZZ
thioesterase superfamily protein
13_1_20cm_full_scaffold_2334_10

Not on your lists

comp(11565..12038)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHN97945.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
two component sigma-54 specific Fis family transcriptional regulator; K07713 two-component system, NtrC family, response regulator HydG
13_1_20cm_full_scaffold_2334_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12216..14831)
DNA (2616bp) protein (872aa)
Putative helicase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
helicase, DEAD/DEAH family
13_1_20cm_full_scaffold_2334_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15195..17315
DNA (2121bp) protein (707aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3D0C2_9BACT
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methyl-accepting chemotaxis sensory transducer
13_1_20cm_full_scaffold_2334_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17409..18860
DNA (1452bp) protein (484aa)
OmpA/MotB domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4B5_PALPW
ompA family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ompa/motb domain-containing protein
13_1_20cm_full_scaffold_2334_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18857..20449
DNA (1593bp) protein (531aa)
OmpA/MotB domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2P7_PALPW
ompa/motb domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADQ78991.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludi
13_1_20cm_full_scaffold_2334_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

20494..22806
DNA (2313bp) protein (771aa)
Peptidase M14, carboxypeptidase A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028C7_SOLUE
peptidase M14, carboxypeptidase A Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M14 carboxypeptidase A
13_1_20cm_full_scaffold_2334_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22872..24029
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L022_THERP
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative glycosyl hydrolase domain DUF4015
13_1_20cm_full_scaffold_2334_17
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(24039..25106)
DNA (1068bp) protein (356aa)
leuC2; 3-isopropylmalate dehydratase (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_16_Acidobacteria_68_9_curated
leuC2; 3-isopropylmalate dehydratase (EC:4.2.1.33)
3-isopropylmalate dehydratase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G0G3_SORC5
Displaying 17 items

View Taxonomy