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13_1_20cm_full_scaffold_3478

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_3478_1
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

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1..192
DNA (192bp) protein (64aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9A3_9GAMM
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit
13_1_20cm_full_scaffold_3478_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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270..2063
DNA (1794bp) protein (598aa)
pyruvate carboxylase subunit B (EC:4.1.1.3); K01960 pyruvate carboxylase subunit B [EC:6.4.1.1] Tax=RBG_16_Euryarchaeota_41_19_curated
oxaloacetate decarboxylase subunit alpha (EC:6.4.1.1)
Oxaloacetate decarboxylase alpha subunit n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D766_METSW
13_1_20cm_full_scaffold_3478_3
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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2056..3498
DNA (1443bp) protein (481aa)
pycA; pyruvate carboxylase, subunit A (EC:6.4.1.1)
Pyruvate carboxylase, subunit A {ECO:0000313|EMBL:ADL58084.1}; EC=6.4.1.1 {ECO:0000313|EMBL:ADL58084.1};; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacte
Pyruvate carboxylase, subunit A n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PV36_METTM
13_1_20cm_full_scaffold_3478_4
unknown

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comp(3485..5752)
DNA (2268bp) protein (756aa)

This feature has no annotations

13_1_20cm_full_scaffold_3478_5
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(5752..6312)
DNA (561bp) protein (187aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LD3_SYMTH
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Dehalo_02
RNA polymerase ECF-type sigma factor
13_1_20cm_full_scaffold_3478_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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6537..7850
DNA (1314bp) protein (438aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3B1_SPHTD rbh
adenylosuccinate lyase
13_1_20cm_full_scaffold_3478_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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7847..8776
DNA (930bp) protein (310aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF02_CHLTF
13_1_20cm_full_scaffold_3478_8
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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8763..9011
DNA (249bp) protein (83aa)
phosphoribosylformylglycinamidine synthase subunit PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Chloroflexi_68_14_curated
Phosphoribosylformylglycinamidine synthase subunit PurS n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8D6G4_9BACL
phosphoribosylformylglycinamidine synthase PurS
13_1_20cm_full_scaffold_3478_9

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9008..9709
DNA (702bp) protein (234aa)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEF7_RHOM4
Marine sediment metagenome DNA, contig: S01H1_L01385 {ECO:0000313|EMBL:GAF79265.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
phosphoribosylformylglycinamidine synthase I
13_1_20cm_full_scaffold_3478_10
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

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9709..11877
DNA (2169bp) protein (723aa)
phosphoribosylformylglycinamidine synthase subunit II; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_13_Chloroflexi_53_26_curated
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHA8_9FIRM
13_1_20cm_full_scaffold_3478_11
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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11907..13307
DNA (1401bp) protein (467aa)
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RBG_13_Chloroflexi_50_10_curated
Amidophosphoribosyltransferase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B0I4_HERA2
amidophosphoribosyltransferase
13_1_20cm_full_scaffold_3478_12

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13304..14311
DNA (1008bp) protein (336aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=uncultured bacterium 270 RepID=E3T6V1_9BACT
13_1_20cm_full_scaffold_3478_13
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14308..14898
DNA (591bp) protein (197aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IN58_RHOCS
13_1_20cm_full_scaffold_3478_14
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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14895..16415
DNA (1521bp) protein (507aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=PUR9_MOOTA
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoana
13_1_20cm_full_scaffold_3478_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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16438..17079
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VRW6_DYAFD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
Displaying 15 items

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