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13_1_20cm_full_scaffold_517

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_517_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3..239)
DNA (237bp) protein (79aa)
Acyl carrier protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGQ2_9CHLR
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
acpP; acyl carrier protein
13_1_20cm_full_scaffold_517_2
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(316..1068)
DNA (753bp) protein (251aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CCF83868.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CCF83868.1};; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterale
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGQ6_9CHLR
3-oxoacyl-ACP reductase
13_1_20cm_full_scaffold_517_3
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1058..1936)
DNA (879bp) protein (293aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoacti
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Desmospora sp. 8437 RepID=F5SCR6_9BACL
malonyl CoA-acyl carrier protein transacylase
13_1_20cm_full_scaffold_517_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(1996..2172)
DNA (177bp) protein (59aa)
50S ribosomal protein L32 n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D463
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RBG_16_RIF_CHLX_69_14_curated
50S ribosomal protein L32
13_1_20cm_full_scaffold_517_5
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

Not on your lists

comp(2200..2685)
DNA (486bp) protein (162aa)
Archaeal/vacuolar-type H+-ATPase subunit H n=1 Tax=Patulibacter medicamentivorans RepID=H0E9S0_9ACTN
hypothetical protein Tax=RBG_13_WOR_2_44_8_curated
hypothetical protein
13_1_20cm_full_scaffold_517_6
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2672..3175)
DNA (504bp) protein (168aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
Phosphopantetheine adenylyltransferase n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DAJ9_CLOS4
coaD; pantetheine-phosphate adenylyltransferase
13_1_20cm_full_scaffold_517_7
Selenomonas sp. CM52, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3172..3735)
DNA (564bp) protein (188aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EJU28875.1}; EC=2.1.1.- {ECO:0000313|EMBL:EJU28875.1};; TaxID=936381 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae
RNA methyltransferase, RsmD family n=1 Tax=Selenomonas sp. CM52 RepID=J6HYZ9_9FIRM
methyltransferase
13_1_20cm_full_scaffold_517_8
RBG_16_CPR_42_10_curated, Bacteria

Not on your lists

comp(3931..5136)
DNA (1206bp) protein (402aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RBG_16_CPR_42_10_curated
sti:Sthe_1906 ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.1.-] alias=ACD28_C00003G00007,ACD28_1027.11124.12G0007,ACD28_1027.11124.12_7 id=30752 tax=ACD28 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=PER organism_desc=PER
ATP-dependent DNA helicase RecG
13_1_20cm_full_scaffold_517_9
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(5922..6752)
DNA (831bp) protein (277aa)
DegV family protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHJ4_9FIRM
DegV family protein Tax=RBG_13_Chloroflexi_54_9_curated
degV family protein
13_1_20cm_full_scaffold_517_10
unknown

Not on your lists

6856..7173
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_full_scaffold_517_11
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(7195..8802)
DNA (1608bp) protein (536aa)
DAK2 domain-containing protein n=1 Tax=Dehalococcoides mccartyi GY50 RepID=V5QD93_9CHLR
Dak phosphatase; K07030 Tax=RBG_13_Chloroflexi_56_8_curated
dihydroxyacetone kinase
13_1_20cm_full_scaffold_517_12
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(8831..9247)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00037C8B1E
hypothetical protein Tax=RBG_16_Chloroflexi_56_8_curated
hypothetical protein
13_1_20cm_full_scaffold_517_13
unknown

Not on your lists

comp(9506..10114)
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_20cm_full_scaffold_517_14
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10150..10791)
DNA (642bp) protein (214aa)
Ribulose-phosphate 3-epimerase n=1 Tax=Bacillus sp. 17376 RepID=V6T8Q5_9BACI
rpe; ribulose-phosphate 3-epimerase
Tax=BJP_IG2102_Syntrophobacterales_60_12
13_1_20cm_full_scaffold_517_15
unknown

Not on your lists

comp(10791..11636)
DNA (846bp) protein (282aa)

This feature has no annotations

13_1_20cm_full_scaffold_517_16
Pseudoalteromonas undina, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11698..12210)
DNA (513bp) protein (171aa)
DUMP phosphatase {ECO:0000313|EMBL:ERG61576.1}; EC=3.1.3.5 {ECO:0000313|EMBL:ERG61576.1};; TaxID=1117320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae
DUMP phosphatase n=1 Tax=Pseudoalteromonas undina NCIMB 2128 RepID=U1MHY3_9GAMM
2-haloalkanoic acid dehalogenase
13_1_20cm_full_scaffold_517_17
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12210..13226)
DNA (1017bp) protein (339aa)
ribosomal RNA large subunit methyltransferase N; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=GWC2_RIF_CHLX_73_18_curated
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4T7_SPHTD
radical SAM enzyme, Cfr family
13_1_20cm_full_scaffold_517_18
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(13282..13998)
DNA (717bp) protein (239aa)
peptidase membrane zinc metallopeptidase putative; K06973 alias=RBG9_57_54,RBG9_C00057G00054 id=1246762 tax=RBG9 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi
peptidase membrane zinc metallopeptidase putative; K06973 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
peptidase, membrane zinc metallopeptidase
13_1_20cm_full_scaffold_517_19
unknown

Not on your lists

14146..14295
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_full_scaffold_517_20
unknown

Not on your lists

14362..14502
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_20cm_full_scaffold_517_21
unknown

Not on your lists

14612..14803
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_full_scaffold_517_22
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(14800..15312)
DNA (513bp) protein (171aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUQ0_9CHLR
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:EFH84118.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" s
transferase hexapeptide repeat containing protein
13_1_20cm_full_scaffold_517_trna_1
unknown

Not on your lists

comp(15327..15410)
DNA (84bp)
transferRNA
13_1_20cm_full_scaffold_517_23
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

15741..16607
DNA (867bp) protein (289aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THU8_9CHLR
two component transcriptional regulator Tax=RBG_16_RIF_CHLX_70_13_curated
putative OmpR family two-component response regulator
13_1_20cm_full_scaffold_517_24
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16702..17253
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PWJ2_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU75272.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
13_1_20cm_full_scaffold_517_25
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17360..17485)
DNA (126bp) protein (42aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;"
Adenylate/guanylate cyclase n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q118H4_TRIEI
adenylate/guanylate cyclase
Displaying 26 items

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